MCA_01146_1

Browser: contigA:3643684-3644491+

RNA-seq: read pairs 10, FPKM 0.5, percentile rank 6.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1081

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   16 - 268

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 15

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   11 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   2 - 10

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 1

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 16

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_01146_1
MLTTLVVSAVAAFTASDIVRVGREKFCKRTSKPNFSKSELKAIEERGLTKENDVSKRLSITRKMMEVHSYDRSSLVPTYY
TENQTSVYLDYGVIEKINKRNSIQVTPEIIKYMTNRMDKVRRKTFVKELESISKKALEQYSRKTGFTDIHAVAYHLPFDF
EKNPNFKDLKVSYFDIDFEFGFFYHVAIRRLSEKTPINKEFKATEMAAGFNRHEVDPNARFHNSLSRYPDITNMPMFNNS
CVQFEVSNEPLKNEEKIKRKVGKSLLCF

GO term prediction