Protein
MCA_01142_1
Length
258 amino acids
Browser: contigA:3637028-3637843+
RNA-seq: read pairs 50, FPKM 2.4, percentile rank 12.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PGPZ | to reverse transcriptase | |
|---|---|---|---|
| SGD closest match: | S000003537 | TY3B-I | Transposon Ty3-I Gag-Pol polyprotein |
| CGD closest match: | CAL0000191508 | ORF298 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A060T683_BLAAD | 43.73% | 279 | 6e-59 | ARAD1B13926p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13926g PE=4 SV=1 |
| UniRef50_A0A060T683 | 43.73% | 279 | 2e-55 | ARAD1B13926p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T683_BLAAD |
| B5FVH8_YARLI | 34.80% | 273 | 1e-44 | YALI0E14388p2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14388g2 PE=4 SV=1 |
| YI31B_YEAST | 46.45% | 155 | 3e-39 | Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2 |
| A0A167D9C8_9ASCO | 36.77% | 155 | 9e-22 | Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_901 PE=4 SV=1 |
| A0A1D8PI28_CANAL | 30.67% | 163 | 8e-12 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ORF298 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1268
Protein family membership
None predicted.
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
active site cd09274
-
RNA/DNA hybrid bin...
Protein sequence
>MCA_01142_1 MILQAKTKWTETQTQAFETLKEKLIDAPILISPNSKHTYVLTTDASSRLLGVIAYFSRKLKPTEVNYAVRDLEFLAVVDA LQHFRPLLLGRHFILRTDHFSLTQLQSQTKPPHGRIARWFDALADYDFTTQYIKGKQNVVADALSRQPSVNAIDTNDATN EEEELMSTPSDDIIRRVRDKLDSDDYFANVIRILNDENDPAHRTISSKYHLDDGLLYFKITPVLDSNQYRLCIPDCSLRA DLVAMAHTNGHYGPYRTF
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.