MCA_01104_1

Browser: contigA:3510658-3512356+

RNA-seq: read pairs 1, FPKM 0.0, percentile rank 1.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0497
Predicted cleavage: 12

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   564 - 565

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   20 - 540

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 19

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   16 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   7 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 6

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 19

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   541 - 563

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   541 - 563

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    413 - 473

    MobiDB Lite
    mobidb-lite (disorder_prediction)

    503 - 539

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_01104_1
MRFLSNINILSILALEAAASPLTMKADAIIDSLPGLPHNNNNNNFGNWLMEKRQFDKTSMTPGMYCNPQFVDSPAGCFDW
CETIYHAVYTHYNNLGHDTVCASKDGPINSVPAPGQPYDRYAEKYALHKETCYKCAETYPNVAAEGLKKMLGQCEVFPKP
TSPDCSSYCIDVSSVTTEQCNQACQVVLGAVDLRRNLKRQVPNYNLNSIYCGDIYYWMAEFSTCLLCTKDTSLVNQIKAH
ANVCGHVDFDTGFIPSCASSTTSTISTIYSTSTVAASTKTIRVTVTLPDASSLLTDTSIAVTSTAQSLTPSSIIDVALAA
NFYNHTAFASYSNSTSFTFYSNSTLGLPSFSNTTASGVFTSFSNTTTGCSESNMLGVPKTSNGPSVIITSKGSENVAMST
KTVYAICSSTCKNQSKGKDSVDSNPTKYPSPSLQPSNISKGDKNSSPNPNPQPTNTNRPLASDNSFSSSNIEPSITVPTL
TTSYLTSLPISETQKSFFSSLTTTSRFSSNETVQQRGDRQTNSTIPSKPKGPDGMDRTNSAASVTISSVITAMIAGTITL
LALTT

GO term prediction