Protein
MCA_01094_1
Length
287 amino acids
Gene name: MTR3
Description: Exosome complex component MTR3
Browser: contigA:3489124-3489988+
RNA-seq: read pairs 1086, FPKM 46.6, percentile rank 63.7% (100% = highest expression)
Protein function
| Annotation: | MTR3 | Exosome complex component MTR3 | |
|---|---|---|---|
| KEGG: | K12587 | MTR3 | exosome complex component MTR3 |
| EGGNOG: | 0PIBF | MTR3 | 3' exoribonuclease family protein |
| SGD closest match: | S000003390 | MTR3 | Exosome complex component MTR3 |
| CGD closest match: | CAL0000191642 | CAALFM_CR02550CA | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00606_1 | 56.77% | 303 | 8e-109 | MIA_00606_1 |
| A0A0J9X9Z7_GEOCN | 49.66% | 290 | 1e-90 | Similar to Saccharomyces cerevisiae YGR158C MTR3 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA06s03255g PE=4 SV=1 |
| UniRef50_A0A0J9X9Z7 | 49.66% | 290 | 2e-87 | Similar to Saccharomyces cerevisiae YGR158C MTR3 Exosome non-catalytic core component n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9Z7_GEOCN |
| A0A167FML4_9ASCO | 43.01% | 286 | 2e-64 | Mtr3p OS=Sugiyamaella lignohabitans GN=MTR3 PE=4 SV=1 |
| A0A060TID0_BLAAD | 41.58% | 279 | 4e-57 | ARAD1D37752p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D37752g PE=4 SV=1 |
| Q6C6V0_YARLI | 39.85% | 271 | 3e-49 | YALI0E06039p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E06039g PE=4 SV=1 |
| A0A1E3PS06_9ASCO | 33.92% | 286 | 8e-48 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44482 PE=4 SV=1 |
| A0A1D8PS88_CANAL | 28.00% | 250 | 2e-25 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR02550CA PE=4 SV=1 |
| MTR3_YEAST | 30.14% | 219 | 3e-19 | Exosome complex component MTR3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MTR3 PE=1 SV=1 |
| A0A1E4TAW5_9ASCO | 31.25% | 208 | 2e-14 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_45387 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0435
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
287
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01094_1 MATTQDRRRILGPADTQSLVFPTNSEKSTKASKSKNHDGKNIRPVFIRTGPVANANGSAFWEAGDIQIQCSVHGPRPIRG SFIESAIFNVEAKLSPFSVNNNDLESVQSAQFGTGNGAARPNGTSALERTLASFVQSSLTPSINLDMYPKSGLDLFITVI NKGSNSKALIAACVNAATVALIDASISLRDMVTCSSAVLLDKNSIYLDPEFPTPSAKLDMVISFMTARNGEIVGMAIDGG EITLDILDLCVNENLRAATDIRTLINGVLLSEFRKKEELFLAEASKN
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.