Protein

MCA_01071_1

Length
236 amino acids

Gene name: RPE1

Description: Ribulose-phosphate 3-epimerase

Browser: contigA:3402773-3403484-

RNA-seq: read pairs 1613, FPKM 84.1, percentile rank 76.1% (100% = highest expression)

Protein function

Annotation:RPE1Ribulose-phosphate 3-epimerase
KEGG:K01783rpe ribulose-phosphate 3-epimerase [EC:5.1.3.1]
EGGNOG:0PGBPRPE1ribulose-phosphate 3-epimerase
SGD closest match:S000003657RPE1Ribulose-phosphate 3-epimerase
CGD closest match:CAL0000177366orf19.7108Ribulose-phosphate 3-epimerase

Protein alignments

%idAln lengthE-value
MIA_01517_174.89%2315e-127MIA_01517_1
A0A0J9XK29_GEOCN65.25%2361e-104Ribulose-phosphate 3-epimerase OS=Geotrichum candidum GN=BN980_GECA32s00208g PE=3 SV=1
A0A1E3PFN1_9ASCO64.50%2312e-104Ribulose-phosphate 3-epimerase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_75769 PE=3 SV=1
A0A060TAK5_BLAAD61.97%2344e-103Ribulose-phosphate 3-epimerase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D20306g PE=3 SV=1
Q6CC71_YARLI60.87%2302e-94Ribulose-phosphate 3-epimerase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C11880g PE=3 SV=1
UniRef50_Q6CC7160.87%2305e-91Ribulose-phosphate 3-epimerase n=12 Tax=cellular organisms TaxID=131567 RepID=Q6CC71_YARLI
A0A1E4TAP7_9ASCO56.41%2349e-95Ribulose-phosphate 3-epimerase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_28544 PE=3 SV=1
RPE_YEAST53.69%2449e-89Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPE1 PE=1 SV=1
A0A1D8PQI4_CANAL51.26%2383e-86Ribulose-phosphate 3-epimerase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7108 PE=3 SV=1
A0A167DSX9_9ASCO57.29%1991e-79Ribulose-phosphate 3-epimerase RPE1 OS=Sugiyamaella lignohabitans GN=RPE1 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2069

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 236

Detailed signature matches

  1. Family IPR000056
    Ribulose-phosphate 3-epimerase-like
    1. PS01086 (RIBUL_P_3_...)
    2. cd00429 (RPE)
    3. PS01085 (RIBUL_P_3_...)
    4. PF00834 (Ribul_P_3_...)
  2. Family IPR026019
    Ribulose-phosphate 3-epimerase
    1. PIRSF001461 (RPE)
  3. Domain IPR013785
    Aldolase-type TIM barrel
    1. G3DSA:3.20.20.70
  4. Domain IPR011060
    Ribulose-phosphate binding barrel
    1. SSF51366 (Ribulose-...)

Residue annotation

  1. substrate binding ...
  2. hexamer interface ...
  3. metal binding site...

Protein sequence

>MCA_01071_1
MSLKAIIAPSILSGDFADLAADSQKILDKTADWLHVDVMDGHFVPNLTFGPPVVKALRAHIPKGAAFFDCHMMVSHPAQW
VADMAGAGADQYTFHLEAAQASDYEIPGGESTGDKVIDLINYIKSKGMKVGITIKPGTPVEDMLPYADKIDIALIMTVEP
GFGGQKFMGDMMPKVKTLREKFPQLNIEVDGGLGPDNIEIAAEAGANVIVAGTSVYKSADQEATIKLLRQKVTEKL

GO term prediction

Biological Process

GO:0005975 carbohydrate metabolic process
GO:0006098 pentose-phosphate shunt
GO:0008152 metabolic process

Molecular Function

GO:0003824 catalytic activity
GO:0004750 ribulose-phosphate 3-epimerase activity
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives

Cellular Component

None predicted.