MCA_01050_1

Browser: contigA:3353334-3354675-

RNA-seq: read pairs 190, FPKM 5.3, percentile rank 17.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.6514
Predicted cleavage: 12

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   31 - 446

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 30

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   24 - 30

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   16 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)

Protein sequence

>MCA_01050_1
MRLIARLPAHPHTVRLIFALALADTHYALSKQDTVLIDPITGKQVNEIATILKEEDVEKIYLYTESVFYLKRKQPCGASD
PEQYDSNWRRFDHISPSSYISPGCLIFNSGVIYLRDWAYTKSNKKAPKDALDFLLTTMEVVPEKQIKGYLKSVSEAMKKL
ITSQMDILWNQKDRQSPENIHQLINYAIHYSVLMPTFVALVFCSLFPYGDPKSTTIFNDLARCFPEEIPQFSSAIDYHLL
KSGLFNTRGILEKDGGTVSLDYVRMVALTLIGPGAYANLHILRAFGLKYCRGQLSHEEFKVAIGYLYVDRFYDNHKLDGK
YNTNVYMTTKDKYCNDCTRWIHYTLRVGYLSVRFGYDIIGHILKVSSPGSPRLNLADKFNGRRQDFLVKYEAEFMKYSEE
EVLYDSSDLDFTKLMSSMDYLGPYSGRSLIDKKHESYIVTSKHVYI

GO term prediction