Protein
MCA_01010_1
Length
627 amino acids
Browser: contigA:3211290-3213174+
RNA-seq: read pairs 579, FPKM 11.4, percentile rank 28.2% (100% = highest expression)
Protein function
| EGGNOG: | 0PKWS | FG05256.1 | WD repeat-containing protein |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01533_1 | 34.84% | 508 | 7e-79 | MIA_01533_1 |
| A0A0J9XGB8_GEOCN | 25.78% | 450 | 2e-33 | Similar to Saccharomyces cerevisiae YNL187W SWT21 Protein involved in mRNA splicing OS=Geotrichum candidum GN=BN980_GECA13s00714g PE=4 SV=1 |
| UniRef50_A0A0J9XGB8 | 25.78% | 450 | 4e-30 | Similar to Saccharomyces cerevisiae YNL187W SWT21 Protein involved in mRNA splicing n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XGB8_GEOCN |
| Q6C701_YARLI | 34.59% | 133 | 2e-17 | YALI0E04873p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E04873g PE=4 SV=1 |
| A0A1E3PIV9_9ASCO | 26.82% | 343 | 4e-17 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51979 PE=4 SV=1 |
| A0A167CEG1_9ASCO | 39.33% | 89 | 1e-14 | Swt21p OS=Sugiyamaella lignohabitans GN=SWT21 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.3534
Predicted cleavage: 22
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
627
Detailed signature matches
Protein sequence
>MCA_01010_1 MDVVQPLNNNSYLKSQLSLRLQTCSNIYYQSKQSENKPSCYINTDKVWTLESEATKTSTNEKQQAPSFIQRSKVPFYFKS CQWTADGSSVLTTSSDNALRLFLVPPDSLQNHNDTDQSLLPYIRICFPSAPTGVSLYPGFDISQYHPALALVSCVNQPIR LYNLHDSTLASGSNKPNSLASYPLYNPNLDTFDNALSIVFPNSNNYSYLFEDSDGITDSSMDDIFLAGTQRQRGRVDMFS LLRPGSSFESSPPLASAFVPSFFHGTNCHGYKKAIVSSIACKPLTYQQNSSYLTVVGFYQGGKRNQNHFKPVDENGRGKF KGNIPFSELAMYDFRVGETSQCILLSKKKKTSQMKDNELDYLNYGNGTYQVLWNPPGSATGSEHLVYQVLRNSPDILVRD SRMGLLEVGWLFNTFSDEENVENSTRKLYERNQRVESTWVPRTSSPRDENENKQDYYDTFRTDKTVGFDLWVGGSNGRVS VFKNPAHNICQTRQQNKDTESQAATVEHLQMHGNDTTVCGLSIRPKLLQYGIKTHLAAGNNDSEFFPQESANNAGEEEYN SDMTLDNNTRNITSVIATVSGTKPSRDIFIANNDSSSSDDEDDKMPTNVMNYHSESEFESSLKIWIV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.