Protein

MCA_01000_1

Length
351 amino acids

Browser: contigA:3170924-3171980-

RNA-seq: read pairs 1088, FPKM 38.2, percentile rank 59.4% (100% = highest expression)

Protein function

KEGG:K06634CCNH cyclin H
EGGNOG:0PMZ9FG02126.1cyclin ccl1
SGD closest match:S000006229CCL1Cyclin CCL1
CGD closest match:CAL0000186980orf19.4542TFIIH complex kinase subunit

Protein alignments

%idAln lengthE-value
A0A0J9X6Q7_GEOCN51.40%3217e-106Similar to Saccharomyces cerevisiae YPR025C CCL1 Cyclin associated with protein kinase Kin28p OS=Geotrichum candidum GN=BN980_GECA04s00560g PE=3 SV=1
UniRef50_A0A0J9X6Q751.40%3211e-102Similar to Saccharomyces cerevisiae YPR025C CCL1 Cyclin associated with protein kinase Kin28p n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6Q7_GEOCN
MIA_02016_152.20%3188e-105MIA_02016_1
A0A161HLN0_9ASCO47.26%3471e-98TFIIH complex kinase subunit CCL1 OS=Sugiyamaella lignohabitans GN=CCL1 PE=3 SV=1
A0A060T8V4_BLAAD44.48%3081e-88ARAD1C32648p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C32648g PE=3 SV=1
A0A1E3PK28_9ASCO38.80%3173e-68Cyclin-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_79187 PE=4 SV=1
CCL1_YEAST35.88%3402e-63Cyclin CCL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCL1 PE=1 SV=1
Q6CHN1_YARLI37.18%3122e-61YALI0A06996p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A06996g PE=4 SV=1
Q59T89_CANAL34.06%3674e-61TFIIH complex kinase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4542 PE=3 SV=1
A0A1E4TIG6_9ASCO23.58%2122e-08Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29937 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2336

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 351

Detailed signature matches

  1. Domain IPR013763
    Cyclin-like
    1. G3DSA:1.10.47...
    2. SSF47954 (Cyclin-like)
    3. SM00385 (cyclin_7)
    4. cd00043 (CYCLIN)
  2. Domain IPR006671
    Cyclin, N-terminal
    1. PF00134 (Cyclin_N)
  3. Domain IPR031658
    Cyclin, C-terminal domain 2
    1. PF16899 (Cyclin_C_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Residue annotation

  1. binding site 1 cd0...
  2. binding site 2 cd0...

Protein sequence

>MCA_01000_1
MTQVTDDDLYRHTSQYRVWSFTKEELIRRRKEVYTQAAERVRKSLQEKEITEQQIDVISFEDEQKLVYFYASKALDVANA
FGMTSQVKATALSYFFKFYLVHSVMDHHPKSILLTCVFLAAKAENHLIPINTFCETIPKTKPEDILGREFLVLESLSFTL
MVLNGYRPLRGLFLDIQAVLPSTPSMTLGQLHDDAKDIIVQSFMSDAVFLFTPPQISMSALLMANETITMEYLHKKFDKD
GLLGKEYRKKSNGVIDDKGVEDFDTLLKVLKECKHVIESKPSIPTSAESKEIDRRLYHSLNPEKMLNLSKRKLARSQSPS
SQGTDGTSGNNNGNVTNFESEEIAAKRLKQE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.