Protein
MCA_00971_1
Length
659 amino acids
Browser: contigA:3089800-3091886+
RNA-seq: read pairs 1309, FPKM 24.5, percentile rank 47.2% (100% = highest expression)
Protein function
| EGGNOG: | 0QE4I | FG01159.1 | YT521-B-like splicing factor |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00244_1 | 52.38% | 420 | 4e-124 | MIA_00244_1 |
| A0A0J9X7I9_GEOCN | 49.16% | 415 | 6e-118 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s04223g PE=4 SV=1 |
| UniRef50_A0A0J9X7I9 | 49.16% | 415 | 1e-114 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7I9_GEOCN |
| A0A060TCL2_BLAAD | 36.97% | 422 | 8e-65 | ARAD1B17270p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B17270g PE=4 SV=1 |
| A0A167E308_9ASCO | 45.79% | 297 | 4e-65 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1876 PE=4 SV=1 |
| Q6C164_YARLI | 34.90% | 404 | 1e-63 | YALI0F18876p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F18876g PE=4 SV=1 |
| A0A1E4TD70_9ASCO | 33.17% | 416 | 2e-59 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20446 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0933
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
659
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00590 (RRM_SF)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00971_1 MSSSSKHPTSTDQNAKNLQHLKKKQLNDSQLPQLENSPIIVTSPDNKTMNQSKQHRRPHQQHYHHYYPNQPHRASISGSS SRYYVQNAPRSNYPLPSSSPHQPYYPPQLVYSQPQQQQQQPYHPHHQSDQLISPSGAMPYDPIFLYPQSSVFANYLQLVH PMPNYPPPTMPSHYTTAPAPNHHPHSRHHSYSSPVTPNPSSPIGHPSRGVETLHHLIPAGGVPPTAAPPNSTSAVPGAGY FSVPRGPPKKPKKSGYALWVGNLPPNTTLFELCALFGTNEIQSIFLIQRTLCAFVNYKSEEALIQGKKMFEKRGKSLRGN QLIVEIKTDDITHKQGGNSSRDEIENYFDKLALNDDNRSSNSTSTSSSSSSSSSLALSNDSNKGSSKDRYFVCKSLTIED LVASTTYGLWATQSHNESVFNEAFKTCDNVYLIFSANRAGEYYGYARMAGEIPRTASNKELLSLKNWNWNNDTSDPNKQH SNVPPAIPPQSQIYNPFFPATSPLPQVYPTAANKSIPIPAGRIVDDSCRGTLFWEVTETPSLTSSSKSRSSSSSSPSSSS RNTSRSSSSSSSSASNLSSKHRKSSEDYTALEEEDLGNTNNWTVPFKIQWMSPPGKTVPFYMVRHLKNPYNKNQPVKIAR DGTEIEPSVGKQIIEMFFK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Cellular Component
None predicted.