Protein
MCA_00952_1
Length
246 amino acids
Browser: contigA:2997952-2998773+
RNA-seq: read pairs 663, FPKM 33.2, percentile rank 55.4% (100% = highest expression)
Protein function
| KEGG: | K12826 | SF3A2 | splicing factor 3A subunit 2 |
|---|---|---|---|
| EGGNOG: | 0PI89 | FG01187.1 | Splicing factor 3A subunit 2 |
| SGD closest match: | S000002201 | PRP11 | Pre-mRNA-splicing factor PRP11 |
| CGD closest match: | CAL0000185007 | orf19.12187 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05823_1 | 74.78% | 226 | 2e-114 | MIA_05823_1 |
| A0A0J9X8P5_GEOCN | 71.30% | 223 | 3e-107 | Similar to Saccharomyces cerevisiae YDL043C PRP11 Subunit of the SF3a splicing factor complex, required for spliceosome assembly OS=Geotrichum candidum GN=BN980_GECA06s00087g PE=4 SV=1 |
| A0A1E3PJ92_9ASCO | 64.73% | 224 | 2e-98 | Putative splicing factor 3A subunit 2 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_41515 PE=4 SV=1 |
| UniRef50_A0A0E9NNY8 | 61.64% | 232 | 1e-93 | Uncharacterized protein n=48 Tax=Opisthokonta TaxID=33154 RepID=A0A0E9NNY8_9ASCO |
| A0A060SZN1_BLAAD | 60.71% | 224 | 9e-93 | ARAD1C01980p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C01980g PE=4 SV=1 |
| Q6C7S9_YARLI | 60.78% | 204 | 3e-90 | YALI0D25652p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D25652g PE=4 SV=1 |
| A0A1E4TDJ9_9ASCO | 56.56% | 221 | 2e-82 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30976 PE=4 SV=1 |
| A0A167D035_9ASCO | 59.71% | 139 | 3e-60 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_561 PE=4 SV=1 |
| Q5APP1_CANAL | 39.15% | 258 | 5e-44 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.12187 PE=4 SV=1 |
| PRP11_YEAST | 28.11% | 217 | 7e-18 | Pre-mRNA-splicing factor PRP11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP11 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0654
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
246
Detailed signature matches
no IPR
Unintegrated signatures
-
PF12874 (zf-met)
-
SM01050 (CactinC_ca...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00952_1 MDYQNRVGSKKGGGGVASWSETNANRRERLRKLAMENIDIDKDPYIFKNHLGFFECKLCLTTHVNDGSYLSHTQGRKHQM NLARREMKERERNKTDINFNGSSANAAADSRNKVKKNFLKIGRPGYKITKVRDPVSRQLGLFFQLEYPEIGLDIVPRYRF MSSFEQHVDLPQDKNFQYLVIAAEPYESCAFKIEAKEIDRRPGRFWTYYDKDNKVYYLQLFFKNAHYNGPQGQRSNNIKS RSKATY
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
GO:0005634 nucleus