MCA_00929_1

Browser: contigA:2935603-2937088-

RNA-seq: read pairs 963, FPKM 24.0, percentile rank 46.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7339

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   29 - 494

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 28

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   24 - 28

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   15 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SSF57850 (RING/U-box)
   107 - 166

   SUPERFAMILY
   SSF57850 (RING/U-box)
7. mobidb-lite (disord...)
   40 - 85

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00929_1
MSSSLSNLFWKSPKTSLSLIILAHIGWSLYIHHQTKACSFSNSPVPSTKEEKKEIPEDKYEYFDEEDDEEDDDEDDENEE
DKEKDKELAKTIYDTLYKYSNRILDRESQVKSIDIICSTCDELIVSSPVFVCSQCPLGYICLDCESKIEHDEQHILVKIK
APLSEAQILPEAEALPIWPPLWNEPVSKYPMLKRTLTDSECSRIPGNLSRSAADCRGLFKLFVSIADTAITYDNPHESDP
HNVTFTEVPDDFDQECWPGVGSETILKFFPTAVAPNKALQMFLLDIYHVGISTCQTGIIDFSAFVYAHEMILYSTEPRKL
GYALFCIDRVKSKLDKSSPRKKTSNWHQTKINTPCETFCNMFRAIFYDYHELSKYLFADATNILAHQKRFEEERPKPLKT
LYKVSDGAIPTKIYKDSRVDYNPVSDSFHMESMVDLNNQNYIEMIISTFKETMQEDFPRNYFDSNDFVEFGRQIPLSSPE
IRSWITLCMESAII

GO term prediction