Protein
MCA_00912_1
Length
1,555 amino acids
Browser: contigA:2873867-2878605-
RNA-seq: read pairs 2328, FPKM 18.5, percentile rank 39.3% (100% = highest expression)
Protein function
| KEGG: | K10661 | MARCH6 | E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] |
|---|---|---|---|
| EGGNOG: | 0PHMD | PGUG_02476 | RING finger membrane protein |
| SGD closest match: | S000001292 | SSM4 | ERAD-associated E3 ubiquitin-protein ligase DOA10 |
| CGD closest match: | CAL0000173927 | orf19.5175 | E3 ubiquitin-protein ligase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06233_1 | 40.57% | 594 | 1e-109 | MIA_06233_1 |
| A0A167ETJ3_9ASCO | 39.90% | 391 | 2e-73 | E3 ubiquitin-protein ligase SSM4 OS=Sugiyamaella lignohabitans GN=SSM4 PE=4 SV=1 |
| UniRef50_A0A167ETJ3 | 39.90% | 391 | 5e-70 | E3 ubiquitin-protein ligase SSM4 n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167ETJ3_9ASCO |
| A0A060SZ77_BLAAD | 37.47% | 387 | 2e-64 | ARAD1C03058p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C03058g PE=4 SV=1 |
| A0A1E3PRJ5_9ASCO | 38.46% | 416 | 6e-63 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81133 PE=4 SV=1 |
| A0A0J9XC64_GEOCN | 36.00% | 375 | 2e-56 | Similar to Saccharomyces cerevisiae YIL030C DOA10 Ubiquitin-protein ligase involved in ER-associated protein degradation OS=Geotrichum candidum GN=BN980_GECA07s04542g PE=4 SV=1 |
| A0A1D8PR66_CANAL | 31.41% | 398 | 8e-38 | E3 ubiquitin-protein ligase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5175 PE=4 SV=1 |
| Q6C145_YARLI | 30.45% | 404 | 1e-36 | YALI0F19360p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F19360g PE=4 SV=1 |
| A0A1E4TDI0_9ASCO | 33.43% | 347 | 2e-31 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_144289 PE=4 SV=1 |
| DOA10_YEAST | 30.52% | 344 | 2e-30 | ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SSM4 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0306
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1400
1555
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
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SSF57850 (RING/U-box)
-
-
TRANSMEMBRANE (Tran...)
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cd16702 (RING_CH-C4...)
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mobidb-lite (disord...)
Residue annotation
-
Zn binding site cd...
Protein sequence
>MCA_00912_1 MSDDDQVCRICRSEATPNEPLFHPCKCSGSIRYVHQDCLKEWIEKSNKPPICDLCGYKFTFTKIYSQDLPQDSSDLLIRA ISLFFKKLFYKHIPAFIKVITGIILWLHFPLILKEMLSLSLHLSDTLIINPRPPEFRTRPYNLPLVAYHESQVSFSSSIN NMLPIFVAFFDSAIYYLSEHSFFSPVWAKLYSHTISSTLPIKQITSSQYLNILLNPLFTKKNYTHFLEGIAILSGYVLVY LAVSLLKWSLQTELDRIIQNNDTTLSKFLGVDKLENEFHMERLNEILKTTLAAKRPADALRPQFQAQPPIESSDEEENEN EETGDEISDTEADDNLLRLANIQRRHVFLRDLPEDEIDYSPLSREAKIALDYLRRIDYQGEITIEALQSVDPLEPFDFET DVNYLKTVAKNQEPIHQPRRLEQRPNEELPIQFGNRHRRDEIAFQFGQNNQEGNGFHWGAIEDADDIFNHQQRMDNNNIP NLGRLRNNNDNDFAANRNENLLDQIIQAQLAADRNENPLNANAAAVAAALDEEEEEEPLELNEIRDIIALLGINGSFVNL ISKLMVAVCFSVVLNTGFVCLPYLIGGCLLSGLGFLLVASLEYLIYWGNKLADYILAFFCSIASAVLSSQTQKFQALRQS FLLDAKTTQLHFSLLWKFLRISVYPHSQGPYMIGFLVSLGVAAVITIGYFMAYHYPRFATTLRGKKLEIQLIKNLRIVGL GVKIILITGIEMIIFPMACGTLLVLALLPLHPTATVMDVANFAISNSRIFPLLVWFLGTLYMIKFAVYVNMCRGILRPGV LYFIKDPNDPNLHPIGDIIQRTLTFQLGRIGISAIAYFILIVVCIGSVVWSMRYIFHASVIPFQLSDLSGTIPLFITIPL STIFLLPFNLVFKHFKPAVIIKRAWTAVFRRCCHSLRLSSFLLNSPVPKERGTVHYGSFYAWLTNVQPDYSSPKTEEDLA NIKPNEAMFVLDGHFVRAPNSDTSAHKNLKLFIPVNKDDERIDGKTDEQEEEETKKLIEQRALANGEEVKHEGPYRMTNY FVVYRPPHFRMRVFGFFMFIWGFSFLMVYWVTAVPVLLGSKYVDFAIYLSSKSLSKPLEIPENTVNTPLQFLLGFPSIIL ITQLIFEHETIGKMFNTFKTLGLRGFSDVLLIPYKFHHNLLLSWSKVIASYASIFYFYLLVCPVWIAFPTAYYFADVVQY FFSVAMSPFINYSVLDAVTASYESGNATLALNSTSSSSSTGALLLAHVISGTQNSTTAVEAIQKYSSFLKYSAFPIHPIV YDKHFEFSVFQLSVFTGTIALFYFFLSITCSSVSPFFSKFMRNVFTNERQVRQVANYMELMQPETLYDMLVADKLIQPGE PIPVRVQYTLLNPNVKYALIKHTVPCVLYGALNLIIFEFIRIIFYLLMIFFTPGRFDNLSIPFLSHFWHFNPIYTAYFSV MSLIGSKRLNNFISQSSSSSSLSSSSSSSFWSQLPSKEVQPSQFYFHHLFKFGSTKPTVLFTSYLILPFIAVLIIKLIIT LLYQELRDEEFLIGEVLENLPTENNNNKEEEEVKI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0008270 zinc ion binding
Cellular Component
None predicted.