Protein
MCA_00904_1
Length
259 amino acids
Gene name: RPA34
Description: DNA-directed RNA polymerase I subunit RPA34
Browser: contigA:2846529-2847378-
RNA-seq: read pairs 1105, FPKM 52.5, percentile rank 66.4% (100% = highest expression)
Protein function
| Annotation: | RPA34 | DNA-directed RNA polymerase I subunit RPA34 | |
|---|---|---|---|
| KEGG: | K03003 | RPA34 | DNA-directed RNA polymerase I subunit RPA34 |
| EGGNOG: | 0PQYX | PGUG_01774 | DNA-directed RNA polymerase I subunit RPA34.5 |
| SGD closest match: | S000003684 | RPA34 | DNA-directed RNA polymerase I subunit RPA34 |
| CGD closest match: | CAL0000179921 | RPA34 | DNA-directed RNA polymerase I subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02840_1 | 44.63% | 177 | 1e-35 | MIA_02840_1 |
| A0A0J9X8H0_GEOCN | 29.82% | 171 | 6e-24 | Similar to Saccharomyces cerevisiae YJL148W RPA34 RNA polymerase I subunit A34.5 OS=Geotrichum candidum GN=BN980_GECA05s03310g PE=4 SV=1 |
| UniRef50_A0A0J9X8H0 | 29.82% | 171 | 1e-20 | Similar to Saccharomyces cerevisiae YJL148W RPA34 RNA polymerase I subunit A34.5 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8H0_GEOCN |
| A0A1E3PL96_9ASCO | 33.76% | 157 | 8e-21 | RNA polymerase I, subunit RPA34.5 (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_32533 PE=4 SV=1 |
| RPA34_YEAST | 36.69% | 139 | 4e-19 | DNA-directed RNA polymerase I subunit RPA34 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPA34 PE=1 SV=1 |
| Q5AP67_CANAL | 26.99% | 163 | 4e-14 | DNA-directed RNA polymerase I subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPA34 PE=4 SV=1 |
| A0A1E4TES0_9ASCO | 27.39% | 157 | 5e-13 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2004 PE=4 SV=1 |
| A0A060SYW4_BLAAD | 27.40% | 146 | 3e-11 | ARAD1C04092p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C04092g PE=4 SV=1 |
| Q6CAL2_YARLI | 23.85% | 130 | 6e-08 | YALI0D01782p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D01782g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0873
Protein family membership
- DNA-directed RNA polymerase I, subunit RPA34.5 (IPR013240)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF08208 (RNA_polI_A34)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_00904_1 MSKEPLSKQYISDSDMDDVSSSDTESQTKSFVPPSDYTKIASIPCISSKSLENKEFWLIELPSTLDVSKLQSLPISADFT GSTSATINGESYSLTSSDDHTLIKPGEDIKLSSLRLIAPVGERDSTKTLTLTDKSISKVIRVTPDVKIPEIDYDKEIQPQ PEVKQLTGMKLQHFASGYGPEPENESEASKEPATTPKKAQKKKTESEKKSSKKTPNKKSSKPEELETPSKVSSKKRSKAN GTDGSEPPEKKRKKEKSKA
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.