Protein

MCA_00902_1

Length
286 amino acids

Gene name: TFA2

Description: Transcription initiation factor IIE subunit beta

Browser: contigA:2842896-2843757-

RNA-seq: read pairs 2390, FPKM 102.9, percentile rank 79.2% (100% = highest expression)

Protein function

Annotation:TFA2Transcription initiation factor IIE subunit beta
KEGG:K03137TFIIE2 transcription initiation factor TFIIE subunit beta
EGGNOG:0PHVNPGUG_01783transcription initiation factor
SGD closest match:S000001770TFA2Transcription initiation factor IIE subunit beta
CGD closest match:CAL0000190129orf19.4882Transcription initiation factor IIE subunit beta

Protein alignments

%idAln lengthE-value
MIA_02842_161.97%2841e-117MIA_02842_1
A0A0J9X8P3_GEOCN53.17%2841e-100Transcription initiation factor IIE subunit beta OS=Geotrichum candidum GN=BN980_GECA05s03288g PE=3 SV=1
A0A060T5B1_BLAAD51.06%2843e-94Transcription initiation factor IIE subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C04136g PE=3 SV=1
A0A167FTW9_9ASCO46.90%2904e-85Transcription initiation factor IIE subunit beta OS=Sugiyamaella lignohabitans GN=TFA2 PE=3 SV=1
UniRef50_A0A167FTW946.90%2901e-81Transcription initiation factor IIE subunit beta n=5 Tax=Saccharomycetales TaxID=4892 RepID=A0A167FTW9_9ASCO
A0A1E3PMZ2_9ASCO43.40%2888e-74Transcription initiation factor IIE subunit beta OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45739 PE=3 SV=1
Q6C1Q3_YARLI44.95%2872e-72Transcription initiation factor IIE subunit beta OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F14355g PE=3 SV=1
Q5AP83_CANAL43.55%2871e-63Transcription initiation factor IIE subunit beta OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4882 PE=3 SV=1
T2EB_YEAST46.98%2152e-61Transcription initiation factor IIE subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFA2 PE=1 SV=3
A0A1E4TBP2_9ASCO45.41%2079e-56Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32509 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9292
Predicted cleavage: 45

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 286

Detailed signature matches

  1. Family IPR016656
    Transcription initiation factor TFIIE, beta subunit
    1. PIRSF016398 (TFIIE-...)
  2. Domain IPR003166
    Transcription factor TFIIE beta subunit, DNA-binding domain
    1. PF02186 (TFIIE_beta)
    2. PS51351 (TFIIE_BETA_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00902_1
MSSLSEQLNSFKKHLKSAPVLPKNIIKKPTPSSPSLQAAGQKREGSDSLKNSPKKKKTSASVAAAAMYSQSQAGGGLTSG
AHAGTQAITAIAYIKDKGRPVSFDDIERFLGVSISDLIPRLQRNDRIKLDMAKRQASYVSIFNIYSKHDLLAFLRSQKSF
QGIPYKQLKDGWNGCQEAIEELEKSGEILVLRTKKENSPRYVWANIGEPLGGVDEEFVKIWGSIKVPDSADLPKELEKAQ
LKPTSVDPATIKAKKRTVNDKKQRKPRRGKITNTHMAGILKDYGQI

GO term prediction

Biological Process

GO:0006367 transcription initiation from RNA polymerase II promoter

Molecular Function

None predicted.

Cellular Component

GO:0005673 transcription factor TFIIE complex