Protein
MCA_00876_1
Length
919 amino acids
Gene name: APL6
Description: AP-3 complex subunit beta
Browser: contigA:2758833-2761593+
RNA-seq: read pairs 2584, FPKM 34.7, percentile rank 56.8% (100% = highest expression)
Protein function
| Annotation: | APL6 | AP-3 complex subunit beta | |
|---|---|---|---|
| KEGG: | K12397 | AP3B | AP-3 complex subunit beta |
| EGGNOG: | 0PIJZ | APL6 | AP-3 adaptor complex subunit beta |
| SGD closest match: | S000003493 | APL6 | AP-3 complex subunit beta |
| CGD closest match: | CAL0000198300 | orf19.1323 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06083_1 | 61.04% | 829 | 0.0 | MIA_06083_1 |
| A0A0J9XID7_GEOCN | 50.42% | 831 | 0.0 | Similar to Saccharomyces cerevisiae YGR261C APL6 Beta3-like subunit of the yeast AP-3 complex OS=Geotrichum candidum GN=BN980_GECA20s00692g PE=4 SV=1 |
| UniRef50_A0A0J9XID7 | 50.42% | 831 | 0.0 | Similar to Saccharomyces cerevisiae YGR261C APL6 Beta3-like subunit of the yeast AP-3 complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XID7_GEOCN |
| A0A167DVQ1_9ASCO | 47.25% | 690 | 0.0 | Apl6p OS=Sugiyamaella lignohabitans GN=APL6 PE=4 SV=1 |
| A0A060TBD8_BLAAD | 45.05% | 646 | 6e-164 | AP complex subunit beta OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B15070g PE=3 SV=1 |
| A0A1E3PND0_9ASCO | 38.19% | 775 | 7e-129 | ARM repeat-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_4763 PE=4 SV=1 |
| Q6CDW5_YARLI | 37.88% | 652 | 1e-109 | YALI0B20680p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B20680g PE=4 SV=1 |
| A0A1E4TI27_9ASCO | 37.63% | 598 | 1e-98 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20434 PE=4 SV=1 |
| A0A1D8PLU9_CANAL | 33.54% | 659 | 8e-89 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1323 PE=4 SV=1 |
| AP3B_YEAST | 30.29% | 657 | 3e-81 | AP-3 complex subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APL6 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0280
Predicted cleavage: 29
Protein family membership
- AP-3 complex subunit beta (IPR026740)
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
919
Detailed signature matches
-
-
PIRSF037096 (AP3_beta)
-
-
-
SSF48371 (ARM repeat)
-
-
-
PF01602 (Adaptin_N)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_00876_1 MAEAIPHLGNIGAMLQTARDLTLEAANNVAARLIEDTPIKPAAITEHLNSRTERDRLAGLRQIVSLMCKGNDAVSFFPDV IKNVASSNFEIRKLVYMYLVRYAAYEPDLSLLSINTIQKSLSDDNPVIRALALRVISSIRVQSIVQIICLGIKKCTTDPS PIVRRSAAAAISKCFDINASNGPALLENLKTLLADRNPRVVGSALVTLSKTFPDRIDILHKVYRKICSQLPAMDEWGQNA TLDILLKYARVYLRKPELLSKTVAAMGQTKGDYEQFDDEEEQANSSVEVTTDFTGALMVESDHPVQIALDPDLDLLFNSV YPLLFSRNGSVVISAAKIYFYLGIPKIFEDYRVAGHVVELLRGDLATQYIALINIKIMALARPSVFYRYIKNFFVLPGEM FLISKLKLEILTLLCTKDNANLIVSELKYYSLTSPDPKTISESVQAIGRCITSDTDSSSKILLWLLRQIASPDSNPSLVS ESLNVVRFLVLRNPKNHVITVARLAKMLDKVKVASAKSSLIWLVGEFVGVAPDIAPDVLRKCLKQFAQEESATVRYQIVL LASKLYSWYLDRKREQGDIEEDGTIIDDGNIVPKLYSYTMQLARYDDDYDTRDRTRMFSSLLNSPKNTELATLLLQAPKG CPITSLRDILCGTAFSEKTKLTVKSLSALPKSKSHDYEQFGDSDSEEAQEELESESEEELSSQPSEITPLAKLTLGSTSL VLGHPVDGYQSLPEWTPLDQPLLADPSVRDEDELNDTATTTTSASRGGKFSNLNNLQNMAPNNGTRHRALPMRASSSSSS FSSNATLPVYANGGRKLKEQTLDEFFSKESSSEESSDESQDDDETSEEESSSGEEEESSSEEEGSGSEEESEEGSDASES SSEEESGEESDENAVKDRNSSNADEYDSSSADETTHLTK
GO term prediction
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Molecular Function
GO:0005488 binding
Cellular Component
GO:0030117 membrane coat
GO:0030123 AP-3 adaptor complex