MCA_00847_1

Browser: contigA:2646908-2648192-

RNA-seq: read pairs 3, FPKM 0.1, percentile rank 3.3% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0086

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 427

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   7 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 6

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. TMhelix
   7 - 26

   TMHMM
   TMhelix (TMhelix)

Protein sequence

>MCA_00847_1
MTASYPLVLLFLLFALHSVYSTPISFSQDKPNVISKKSDSSILCSNTSPISCSRPWQKSQKEIGQTRVRKDSTVLSYQSL
KVETRCHSRIMTDLSSCETLCDSVINNFLGMQDTCSGFQLIDEWDISTCLTCVQAWHVNIPRISELEQIYNKCSKSFSPT
MPLCDDTCMKTVKAKTLTECEEKCSKAVHGITFYDGTIKKGQMEDNTSSVCNLIKQRPLLISDCFQCNDKWPNKNFNTLN
NLITKCFSNEHSALQIPKFPYCSVGDEPYDPIESTDLAESMHDSNSELLPTIISRSLPSNDDNCHSFQFYSPERCLKTCQ
EVVGIFEMKLNRTTCYSPTRTDSYQVDVCLSCHKKWANFPSILRFQDYFQRCGINTGESEYPECENSCIDSNQPVELLPE
EQCLDKCREIIEDISIPLIIDGDAKKI

GO term prediction