MCA_00839_1

Browser: contigA:2622416-2626739+

RNA-seq: read pairs 9, FPKM 0.1, percentile rank 3.1% (100% = highest expression)

Protein function

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0553
Predicted cleavage: 46

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   1,440 - 1,440

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   26 - 1,422

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 25

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   21 - 25

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   9 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 8

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 25

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   9 - 31

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   1,423 - 1,439

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    212 - 276

    MobiDB Lite
    mobidb-lite (disorder_prediction)

    349 - 934

    MobiDB Lite
    mobidb-lite (disorder_prediction)

    1,388 - 1,412

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00839_1
MILKHYSKLLLGLILLHYVVTPALAITLPASKDSQNIPKSLKSRSNPISPYLVCGSYKYHTKDSFRKLCNEILEDVTDNR
FRCYIGYELRQRQIYSCRNCNKKFELNLEAVENINYELNKKNCVYTDLADCDKLFCIEPSQFTKGPTCEGIKSRISREVS
RFECKKIPGIYPLLNIYYFCAKIFNWDEVKIWDEKLKHCAINGKFPFVPICGAPEPSPEPSPEPSPEPSPEPSPEPSPEP
SSEPSPEPSPEPSPEPSPEPSPEPSPEPSPSPSCESLPPDFFDCVGKCIGISNIFDQGNNPTEACKLDTEKLNSLNFCLL
CAVKYEPANAYFSDSVLQKIVDCELEIDENCAPPLPSPQPSSSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPSPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPSPSPEPSPEPSPEPSPEPSPEPSPEPSPSPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPSPSPEPSPELSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPESSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPSPSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPKPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSPEPSP
EPSPEPSPEPSLESSLYLSSDPSSTTGTVDSLSSEPLSSSTTSNASSLPSDPFPSSTFGTSDLVTSDVDASSTSQDVTSS
IITISFSSSSYEYSTGSTYQSDLAPTLQPTFSYSFSNTSYISSQTIDTPSSVTNPSSFITLPTKSIHSKSSSYTITGDIS
STSFFYTTTTTTAPASEYTSSDASGTDIITMKTSETSVSDKPATSSTSSFSIVTESSFATSQFDSSSSQSIATSDLSKIS
QTTTGSYPSPSGSTISSAFSIVTITRTLNPDSGQTTTLTISEDGSQTVTIVVPCPESSDSPSSSSFKSYTADTSDISVVT
VTRTLPAHSTETETSTISNDGALIITVIVPCPSCSDSSASLASSGISTAELTTIVSPVTTTKIGSSDYTQTYTSAVSSNE
DKTDIVSVAITTFSSMEYQTSVTESDGSTITYIKTVTTLDISTSIETSVVKSKIETSLSVDETLTPVTTSAISNDSSSID
KDETSSEGIIWSETEVEIVPSKTTLMTETKPSVEQVGSSSDNGSPGQTDINQVNRASHNCHKGSLFTSFLFAFVSFLIYY

GO term prediction