MCA_00838_1

Browser: contigA:2617523-2619998+

RNA-seq: read pairs 8, FPKM 0.1, percentile rank 3.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0693

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   824 - 824

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   25 - 802

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 24

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   20 - 24

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   8 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 7

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 24

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   803 - 823

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

Protein sequence

>MCA_00838_1
MVNFFNKLPVAVGSVLLFSSYVSSQTLSTSIADGSSVVVSDAFFPVPTPTSVNGNLTASSTISSTVVTSSPPRGFPTDLP
GLIHIITQELLDSLLDPQSKDVVDGILKSTIAIFLESFPAVDDLMKAFIRGFSPEQLAAFAEHFTTEFDAFNSSPKGSES
FLKIAELTKYIDNSKAEANLAAALGPLQEAVLAKVTKLATENPSLAGVLGKFSVSIQNLVGKITAIIESGVVPTGTSITS
SVSPTSVPTTLPKLVDIITKELLDSLLNPQSKDVVDEILKSTIAIFLESFPAVEDLISAFFGDFSPEQLADFAKHFTAAF
DAFNSSPKGSEFFSNIAELTKYIDNSKAEANLAAALGPLQEAVLAKVTKLATENPSLAGVLSKFSISLQNLIAKITAIIE
SGVISTVSSTITSTESSSVPTTSAPATGIPTTLPQLVDIIVKELLNSLLDPQSKDVVDGILKSTIAIFLESFPAVEDLIS
AFFGDFSPEQLADFAEHFTSAFDAFNSSPKGAEFFSKIAELTKYIDNSKAEANLAAALGPLQEAVLAKVTKLATENPSLA
GVLSKFSVSLQNLIAKIKSVIESGAIPSISSTIVPTNSSSGASSLIAPTTIITTSTTKTLVFGATETVTITKCIKCIESV
VPTYTTITTASGDKTITVTEPCEVTVTVDDCTTSYKGGVTVTVTEPINPSTKPGKKPVESTTKVTVISDKTVTLTVPCEE
CKTTFTSALTTPESTVYITSSTSVPSLSAKVPAPSSSIPSSFETILTKTETKTQSSVAVIEPSSSTPSGDSGLEQVNGAS
SSYYGIESLIIPVLSTFTILVMFF

GO term prediction