Protein
MCA_00833_1
Length
299 amino acids
Gene name: RBD2
Description: Rhomboid protein 2
Browser: contigA:2601294-2602577-
RNA-seq: read pairs 1439, FPKM 59.3, percentile rank 69.0% (100% = highest expression)
Protein function
| Annotation: | RBD2 | Rhomboid protein 2 | |
|---|---|---|---|
| EGGNOG: | 0PH0G | RBD2 | Rhomboid protein 2 |
| SGD closest match: | S000006167 | RBD2 | Rhomboid protein 2 |
| CGD closest match: | CAL0000190075 | RBD2 | Rhomboid protein 2 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05777_1 | 66.32% | 291 | 6e-116 | MIA_05777_1 |
| A0A0J9XFQ4_GEOCN | 53.24% | 293 | 6e-82 | Similar to Saccharomyces cerevisiae YPL246C RBD2 Possible rhomboid protease OS=Geotrichum candidum GN=BN980_GECA14s00230g PE=4 SV=1 |
| UniRef50_A0A0J9XFQ4 | 53.24% | 293 | 1e-78 | Similar to Saccharomyces cerevisiae YPL246C RBD2 Possible rhomboid protease n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XFQ4_GEOCN |
| RBD2_YARLI | 41.64% | 281 | 1e-63 | Rhomboid protein 2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RBD2 PE=3 SV=1 |
| A0A060T4F3_BLAAD | 42.55% | 235 | 1e-55 | ARAD1C03894p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C03894g PE=4 SV=1 |
| A0A1E3PUU5_9ASCO | 42.86% | 217 | 1e-38 | Rhomboid-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_31093 PE=4 SV=1 |
| RBD2_YEAST | 40.09% | 227 | 3e-38 | Rhomboid protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RBD2 PE=1 SV=1 |
| RBD2_CANAL | 32.63% | 285 | 4e-33 | Rhomboid protein 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RBD2 PE=3 SV=1 |
| A0A167EFZ2_9ASCO | 42.94% | 177 | 7e-34 | Rbd2p OS=Sugiyamaella lignohabitans GN=RBD2 PE=4 SV=1 |
| A0A1E4TLC8_9ASCO | 30.77% | 143 | 3e-12 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_16566 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1056
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
299
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00833_1 MITLRSNPFEPMLASLKVVPPALTSGLLVFMTILFIVGVAVPGFNESLQLQKSTFTKLELNRLTFYPMLHMSLLHLLLNS WALLPLLSSFELQNGTVRTGIVLNVMGTITGVSYILLSFIFYPEGAVLGSSAWVFSFLGYFSYLESKHTPSTVITQNFSI PTVSKPVVLLVITAILVPGSSIVGHMLGLFAGWLLAMGYLKFMTDPPSKVVLFIESKLNRLINLLPPQIRYIKETEGIEL RKTTSTTAHILPLSELAPANSGSSSVITPGGVFNKDSTNKPVEVPFKGDGQKLGTKDSS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0004252 serine-type endopeptidase activity
Cellular Component
GO:0016021 integral component of membrane