Protein

MCA_00804_1

Length
546 amino acids

Browser: contigA:2505184-2506825+

RNA-seq: read pairs 9676, FPKM 218.6, percentile rank 89.1% (100% = highest expression)

Protein function

KEGG:K03251EIF3D translation initiation factor 3 subunit D
EGGNOG:0PGSYFG01314.1Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)

Protein alignments

%idAln lengthE-value
MIA_04515_163.20%5570.0MIA_04515_1
A0A0J9XHZ7_GEOCN61.11%5400.0Eukaryotic translation initiation factor 3 subunit D OS=Geotrichum candidum GN=BN980_GECA19s01176g PE=3 SV=1
A0A1E3PMK3_9ASCO53.10%5330.0Eukaryotic translation initiation factor 3 subunit D OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51329 PE=3 SV=1
A0A167EUE0_9ASCO52.84%5450.0Eukaryotic translation initiation factor 3 subunit D OS=Sugiyamaella lignohabitans GN=moe1 PE=3 SV=1
A0A060SZB0_BLAAD49.91%5472e-177ARAD1C03718p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C03718g PE=3 SV=1
EIF3D_YARLI47.83%5521e-167Eukaryotic translation initiation factor 3 subunit D OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0F14839g PE=3 SV=1
UniRef50_Q6C1N147.83%5523e-164Eukaryotic translation initiation factor 3 subunit D n=6 Tax=Saccharomycetales TaxID=4892 RepID=EIF3D_YARLI
A0A1E4TBP9_9ASCO39.89%5495e-131Eukaryotic translation initiation factor 3 subunit D OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_45603 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0176

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR007783
    Eukaryotic translation initiation factor 3 subunit D
    1. MF_03003 (eIF3d)
    2. PF05091 (eIF-3_zeta)
    3. PIRSF016281 (Transl...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_00804_1
MSFTHKFKVPEFQSVDSPWGPPSKVPEPLRFNEVPYAPYSKSDKLGKPADWVSFPQKDSKDNKRTAHGHRDPYHAYGASS
AVQFLNNEGPTDKGSFSLVDNSRVAKPRQATVLKAKTGGRNNQGQRTNQGPRSQNNNQQRSNNNYTPRKRFVWREERPQK
HRDASVQVGSEWELIQSNGFNELQKLSFDVKPGSTISRHGYVYPYNRNLDKPNVSTKLKHPERSIYNVTTSDDPVIQQFV
AEDAATIYATDSILSLIMCTTKSVYPWDVIINKSNGKIFFDKRDDSPVDMITVDENTYDPPSDTADKSNINSASSLSYEA
TYINENFAANAIEEVESKKVKFEHENPFYKPEEDEDVDPPIPRGYIYRKFNLANTADDEPVNLIVRTKVDAVTPGKNDSL
ITVNALNEYGGPNGVLEWKTKLANQRGAVVAAEVKKNLNKVSRWTVESILAGANTMKIGFVSRVTPKDNRNHIIVGVVGQ
IPEQFANQINLKIANGWGIVKSIVNIVESLDDGKYVLMKDPNASMIKIYKVPEDAFDENDDEENDA

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003743 translation initiation factor activity

Cellular Component

GO:0005737 cytoplasm
GO:0005852 eukaryotic translation initiation factor 3 complex