Protein
MCA_00798_1
Length
766 amino acids
Browser: contigA:2483841-2486142-
RNA-seq: read pairs 920, FPKM 14.8, percentile rank 33.8% (100% = highest expression)
Protein function
| KEGG: | K06100 | SYMPK | symplekin |
|---|---|---|---|
| EGGNOG: | 0QDUP | Domain of unknown function (DUF3453) | |
| SGD closest match: | S000000041 | PTA1 | Pre-tRNA-processing protein PTA1 |
| CGD closest match: | CAL0000179440 | orf19.7041 | RNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X886_GEOCN | 36.50% | 778 | 6e-129 | Similar to Saccharomyces cerevisiae YAL043C PTA1 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF OS=Geotrichum candidum GN=BN980_GECA05s01924g PE=4 SV=1 |
| UniRef50_A0A0J9X886 | 36.50% | 778 | 1e-125 | Similar to Saccharomyces cerevisiae YAL043C PTA1 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X886_GEOCN |
| MIA_00997_1 | 45.70% | 442 | 5e-109 | MIA_00997_1 |
| A0A1E3PHQ2_9ASCO | 34.04% | 426 | 3e-71 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51544 PE=4 SV=1 |
| A0A060TH09_BLAAD | 35.22% | 423 | 4e-67 | ARAD1D35090p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D35090g PE=4 SV=1 |
| A0A167ENX5_9ASCO | 32.18% | 435 | 3e-57 | RNA-processing protein PTA1 OS=Sugiyamaella lignohabitans GN=PTA1 PE=4 SV=1 |
| Q6C2Z4_YARLI | 28.77% | 431 | 3e-39 | YALI0F03883p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F03883g PE=4 SV=1 |
| A0A1D8PQP8_CANAL | 34.20% | 269 | 6e-33 | RNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7041 PE=4 SV=1 |
| A0A1E4TIA8_9ASCO | 25.00% | 348 | 5e-29 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_71999 PE=4 SV=1 |
| PTA1_YEAST | 37.34% | 158 | 8e-24 | Pre-tRNA-processing protein PTA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTA1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0576
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
766
Detailed signature matches
-
-
PF11935 (DUF3453)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00798_1 MSDIATQLELLNSIALKTEQDASNYPQILTAVIDVAQKQTDILLRRWCSNFFIGALTSEAVDEEIKRGFCLKLLDTVMLL LKEDDAHLQRNSITLSAIIYKVAFAHVALNPNEVHIWEQLGEMKTRIFSLWHASRHFGVEAECVKFAQQVIAIQMHNNRD PRLNPQNQSGSKSDFSLSDVPSGHPLITSTLEAESQGLLDRITEVFAYDSFESQVIISTLFALSSLMKSRPTLVSKIIPK VVMFEFWKKEAQASSKEEADLNYRYVDKSIRLFLQHSVKTVGGRFSHQINRYMASLGKPYERLAEKRKAEADLPMDNEAD NKNHVKRIKKEQVKSATPPPPSFPPQPTFDPSKHSTEIPTTGNYSYRDLYTLIEPTNPLNNLEATKIPFNFAVNAVLASI ATANPDSFAKALGVVQQRYKNFQQLSSQASASGSNEIKQENGTHKKHVLAPDENPPLDDNINTKEEEDEQMEVDEDQLQY EQEEQEEDLASLVPAQMFSLPAPTKLSTTEKVKAIDGITTRLIAYQDIIDSNPSEADANATLLIADSEKNAAKGFDSIAI TEQDKKKFWVALLSRLLTRGIGSGKMLADSKDNLSNNDESETVTKNIREKLLQYCIENFWARLDITLEWLNEEWFFEYVE LDPEKQPAKELAESKYFYYVSRVLDNAIPLVEMTDLRDFLRLWSDLPEFNKDLLWRLKSLCVDPDRYKIGFMSLTYLIRF KPPVKKLCLDLLEELYLTNPETRDNASGILKQHRPEFLEKQQSAEK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.