Protein

MCA_00792_1

Length
748 amino acids

Browser: contigA:2464574-2466821+

RNA-seq: read pairs 181, FPKM 3.0, percentile rank 13.7% (100% = highest expression)

Protein function

EGGNOG:0PFZUASA1Component of the ASTRA complex involved in chromatin remodeling (By similarity)

Protein alignments

%idAln lengthE-value
MIA_01001_126.11%3378e-26MIA_01001_1
A0A167ENZ2_9ASCO22.97%4184e-20Putative WD repeat-containing protein alr3466 OS=Sugiyamaella lignohabitans GN=AIP1 PE=4 SV=1
UniRef50_A0A1E3NTT825.84%3567e-16Uncharacterized protein n=4 Tax=Pichia TaxID=4919 RepID=A0A1E3NTT8_9ASCO
A0A0J9X8G8_GEOCN24.43%3527e-16Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA05s01891g PE=4 SV=1
A0A1E3PLD7_9ASCO25.99%3272e-14WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82991 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5777
Predicted cleavage: 37

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 100 200 300 400 500 600 748

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
  3. Repeat IPR001680
    WD40 repeat
    1. SM00320 (WD40_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. NON_CYTOPLASM... (N...)
  2. SIGNAL_PEPTIDE (Sig...)
  3. SIGNAL_PEPTID... (S...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. mobidb-lite (disord...)

Protein sequence

>MCA_00792_1
MSKYLSSFFFVLSLEPYTFSSIPPSIKKMLCAHLRAHPSSVTCSSFFPYPISTSLNDSEQLSSSTSNPPDLAQFLATSDE
SGLIYIWSLTKRRPISIFQAHKGSIIKVEFIPLLQNKTETNSKNSSSLALDNNGVNGLQQLTNLYLLSHSRDNSIKIFDV
FSIIKKSLELGLSRHEASTPLDFKPFNTPNLVYSLPVNTLNFCPVSISTSPLPTSTKTLSDGGNTNDNNSDNNSDDKNKE
TKKDTHELVLSVPSTMDSKNLDVYSISLPHTLKLTRLFQAIPPPPDDTIQPAFKKQTNSTGEDSPMSVLDNDGESGKDKT
GILMSIKLIQVSETVRLLKEKEKPKTTESKEYVLVAGYESGHVVVYSLTIPLDMITEKEEQQQDTKGNTANNADTQNVLK
ENKKVINSNTSLNTTTRPRLEELDVEPLEFKKSSIPSTIPSNKKAGSSGLGSLLKSAPPQKTSPSPKQSSTSSTKSPSNK
PICKILKVCFPHKQPVLSLSYRWKFDSDTTTAKIPSLLIYSSSADSKIIQHKFTFPQFSSTATTTTPLSDITYSWSFYQM
PTPGTCSLAVRDDSAVLATAGWDGMVRIFSFLKPKKEIREDDDKKETKLIKEKEDLGPFLKPLAAFRGGRSNGDITGVSF
GPVASKPVFFAPSSFSSSSGDDGVESNNNSTRKLVLSHRLGRANKLGLCNNSHYNGLRKTTSLANTVAISNDSNLSTQLA
QKAQIADAFPHYMAVAGKDGRIGLYEVY

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.