Protein
MCA_00785_1
Length
825 amino acids
Browser: contigA:2436921-2439399-
RNA-seq: read pairs 941, FPKM 14.1, percentile rank 32.6% (100% = highest expression)
Protein function
| EGGNOG: | 0PMHN | FG06661.1 | Inherit from NOG: Conserved hypothetical, protein |
|---|---|---|---|
| CGD closest match: | CAL0000185245 | RIX1 | Pre-rRNA-processing protein RIX1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01016_1 | 40.72% | 690 | 5e-146 | MIA_01016_1 |
| A0A0J9X8D2_GEOCN | 34.88% | 625 | 9e-101 | Similar to Saccharomyces cerevisiae YHR197W RIX1 Essential component of the Rix1 complex (Rix1p, Ipi1p,Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA OS=Geotrichum candidum GN=BN980_GECA05s02628g PE=4 SV=1 |
| UniRef50_A0A0J9X8D2 | 34.88% | 625 | 2e-97 | Similar to Saccharomyces cerevisiae YHR197W RIX1 Essential component of the Rix1 complex (Rix1p, Ipi1p,Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8D2_GEOCN |
| A0A167D514_9ASCO | 33.64% | 645 | 1e-84 | Ribosome biogenesis protein Rix1 (Predicted) OS=Sugiyamaella lignohabitans GN=AWJ20_747 PE=4 SV=1 |
| A0A060THJ4_BLAAD | 26.75% | 415 | 2e-25 | ARAD1D38874p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D38874g PE=4 SV=1 |
| Q6C103_YARLI | 25.12% | 410 | 8e-24 | YALI0F20350p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F20350g PE=4 SV=1 |
| A0A1E3PGV1_9ASCO | 29.89% | 271 | 1e-19 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83581 PE=4 SV=1 |
| RIX1_CANAL | 23.28% | 464 | 5e-10 | Pre-rRNA-processing protein RIX1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIX1 PE=3 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1174
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
825
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_00785_1 MVSFKAVFNLYIKDIDEDHLDQNAGHILNLLQSETTIADADIKTLQKFNGKVSTFLESKSSLLKWFGACLVSVSIDKSWA ILKSHGATWAGLLIHILEINEKRPTKEVAISALSVIFSKTFGKQELTRDITTPKLPQYLKLLFKLGQINEENSAHASVLS SSNTNKSFTDNNDFIDLRYEEESSDEEGANSKSKITQDGVKKLENVTLSQKLELLNTIVPALNTALIQQPTTFRPFLQRY HALICKVLSLNYVSPSAVSPELLGKVCKGYALLHYSAPKDAEAVMWRFHINNIINLLHQEMSALVSKHVEEDFQIPSESD EHTNWATNNGGSSIQFEKLVLDLAKTKTGHFVQITNKINTIFTLLYTMLKTHTKTSVKFPLGSIITLVDRLLSISVYNKP LPGIEKHQQQLFWAYLDELHVKSFGLLIGVQPLVKSMMLCHLETLMHHTKLYLSFDSSSVALKLRVLHFAQGLLRLMAVV PKSSAIDIPDMVTEAFRLVLPTKDASSKELADALPNSHLFIQYPSQKQIAIVTSFFEAVILTVPELNVSIRSQIDKWLIL SSTSATPDSFHEFFPFKINPSAKTALAASALYPGKATKYSVLPMASKALPRSDLVYSIIHPRLPPSVSAVFMNDKPFASM RLGASKNENQDENDEDSNDENDEQVSNIIAKKRKLDTDSSFIRNQTELKPNEQATESKTVQSTNKVVEEPKSDVLSDLNT ETSQSKYQEPIKDSNSNSPYSEKKSLSLELGENTEAAPKSNNEPIIQISDDEDPEKMDVDEDLEVKVVETVKTSDTIITQ NLDDEEEDDDQFQMPTLDIDSSDEE
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.