Protein

MCA_00785_1

Length
825 amino acids


Browser: contigA:2436921-2439399-

RNA-seq: read pairs 941, FPKM 14.1, percentile rank 32.6% (100% = highest expression)

Protein function

EGGNOG:0PMHNFG06661.1Inherit from NOG: Conserved hypothetical, protein
CGD closest match:CAL0000185245RIX1Pre-rRNA-processing protein RIX1

Protein alignments

%idAln lengthE-value
MIA_01016_140.72%6905e-146MIA_01016_1
A0A0J9X8D2_GEOCN34.88%6259e-101Similar to Saccharomyces cerevisiae YHR197W RIX1 Essential component of the Rix1 complex (Rix1p, Ipi1p,Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA OS=Geotrichum candidum GN=BN980_GECA05s02628g PE=4 SV=1
UniRef50_A0A0J9X8D234.88%6252e-97Similar to Saccharomyces cerevisiae YHR197W RIX1 Essential component of the Rix1 complex (Rix1p, Ipi1p,Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8D2_GEOCN
A0A167D514_9ASCO33.64%6451e-84Ribosome biogenesis protein Rix1 (Predicted) OS=Sugiyamaella lignohabitans GN=AWJ20_747 PE=4 SV=1
A0A060THJ4_BLAAD26.75%4152e-25ARAD1D38874p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D38874g PE=4 SV=1
Q6C103_YARLI25.12%4108e-24YALI0F20350p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F20350g PE=4 SV=1
A0A1E3PGV1_9ASCO29.89%2711e-19Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83581 PE=4 SV=1
RIX1_CANAL23.28%4645e-10Pre-rRNA-processing protein RIX1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIX1 PE=3 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1174

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 825

Detailed signature matches

Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00785_1
MVSFKAVFNLYIKDIDEDHLDQNAGHILNLLQSETTIADADIKTLQKFNGKVSTFLESKSSLLKWFGACLVSVSIDKSWA
ILKSHGATWAGLLIHILEINEKRPTKEVAISALSVIFSKTFGKQELTRDITTPKLPQYLKLLFKLGQINEENSAHASVLS
SSNTNKSFTDNNDFIDLRYEEESSDEEGANSKSKITQDGVKKLENVTLSQKLELLNTIVPALNTALIQQPTTFRPFLQRY
HALICKVLSLNYVSPSAVSPELLGKVCKGYALLHYSAPKDAEAVMWRFHINNIINLLHQEMSALVSKHVEEDFQIPSESD
EHTNWATNNGGSSIQFEKLVLDLAKTKTGHFVQITNKINTIFTLLYTMLKTHTKTSVKFPLGSIITLVDRLLSISVYNKP
LPGIEKHQQQLFWAYLDELHVKSFGLLIGVQPLVKSMMLCHLETLMHHTKLYLSFDSSSVALKLRVLHFAQGLLRLMAVV
PKSSAIDIPDMVTEAFRLVLPTKDASSKELADALPNSHLFIQYPSQKQIAIVTSFFEAVILTVPELNVSIRSQIDKWLIL
SSTSATPDSFHEFFPFKINPSAKTALAASALYPGKATKYSVLPMASKALPRSDLVYSIIHPRLPPSVSAVFMNDKPFASM
RLGASKNENQDENDEDSNDENDEQVSNIIAKKRKLDTDSSFIRNQTELKPNEQATESKTVQSTNKVVEEPKSDVLSDLNT
ETSQSKYQEPIKDSNSNSPYSEKKSLSLELGENTEAAPKSNNEPIIQISDDEDPEKMDVDEDLEVKVVETVKTSDTIITQ
NLDDEEEDDDQFQMPTLDIDSSDEE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.