Protein

MCA_00745_1

Length
1,225 amino acids

Gene name: RAD26

Description: DNA repair and recombination protein RAD26

Browser: contigA:2321443-2325121-

RNA-seq: read pairs 1780, FPKM 17.9, percentile rank 38.3% (100% = highest expression)

Protein function

Annotation:RAD26DNA repair and recombination protein RAD26
KEGG:K10841ERCC6 DNA excision repair protein ERCC-6
EGGNOG:0PHANPGUG_03649DNA repair and recombination protein
SGD closest match:S000003796RAD26DNA repair and recombination protein RAD26
CGD closest match:CAL0000189079CAALFM_CR07910CADNA-dependent ATPase

Protein alignments

%idAln lengthE-value
MIA_05455_163.41%10660.0MIA_05455_1
A0A0J9X497_GEOCN69.44%7560.0Similar to Saccharomyces cerevisiae YJR035W RAD26 Protein involved in transcription-coupled nucleotide excision repair of UV-induced DNA lesions OS=Geotrichum candidum GN=BN980_GECA02s03420g PE=4 SV=1
A0A167DFJ8_9ASCO67.96%7490.0DNA-dependent ATPase RAD26 OS=Sugiyamaella lignohabitans GN=RAD26 PE=4 SV=1
A0A060T2V4_BLAAD63.43%7410.0ARAD1C35904p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C35904g PE=4 SV=1
A0A1E3PNR7_9ASCO64.41%7530.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_57271 PE=4 SV=1
UniRef50_Q6BPT762.43%7560.0DEHA2E10934p n=7 Tax=Saccharomycetales TaxID=4892 RepID=Q6BPT7_DEBHA
A0A1D8PTM3_CANAL61.73%7500.0DNA-dependent ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR07910CA PE=4 SV=1
A0A1E4TKD8_9ASCO60.08%7390.0Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_15801 PE=4 SV=1
Q6CBQ0_YARLI60.59%7410.0YALI0C16643p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C16643g PE=4 SV=1
RAD26_YEAST56.96%7620.0DNA repair and recombination protein RAD26 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0424

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 200 400 600 800 1000 1225

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. PS51192 (HELICASE_A...)
    2. SM00487 (ultradead3)
  3. Domain IPR000330
    SNF2-related, N-terminal domain
    1. PF00176 (SNF2_N)
  4. Domain IPR001650
    Helicase, C-terminal
    1. PS51194 (HELICASE_CTER)
    2. SM00490 (helicmild6)
    3. PF00271 (Helicase_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. G3DSA:3.40.50...
  4. cd00046 (DEXDc)
  5. cd00079 (HELICc)
  6. mobidb-lite (disord...)

Residue annotation

  1. ATP binding site c...
  2. putative Mg++ bind...
  3. nucleotide binding...
  4. ATP-binding site c...

Protein sequence

>MCA_00745_1
MDKSSKSQNVHKTVNIDTNSVQVNSGETGNITQDTTTIEPNEPEDELAVLDTWSVDQDKLEKDVAREADQALIERENELD
EKRLTKSLANKAKFTQALERLEERLYDNIKISEKEKIRKEINKLQDIQLKNIDQDIKEIKERMKERNEKSQIIPSTAKAS
STGSENEPQKNAGETEHEFLVRTGKITPFANTFMGATGSNTILETSKSSMSHQQLRLPGMELDQLSEEEKSDSTNEEQEI
ESDVGSEPEVTQISRRGKKRKADQDDADYDLDDDEEDYEEDYENDSDKEIDEYQLSDVDTSSKQKKTKKKKSSAKKKKTE
DAATEELKKIDDGDINIYNSRLESWLRKRKLYREKMSRKNEDLVDNEEAMEEWLKPHPLHGEFKLNDKFKMPGDIYTSLF
DYQKTCIQWQWELYCQNVGGIIGDEMGLGKTIQIVSFIAGLHYSGLLKKPVLIVCPATVMNQWVNEFHRWWPPLRVCILH
SIGSGMDLKHEESLEETLANSEQGKVSLNSINKLKGAKSIVDSVSRVGHVIITTYVGLRIYSNLLLPKKWGYCVLDEGHK
IRNPNSDISLAAKGVKTTHRIILSGTPIQNNLTELWSLFDFVFPGRLGTLPVFQSEFSIPIKLGGYANATNVQVQTAYKC
AVVLRDLISPYLLRRMKVDVAADLPKKTEKVLFCKLTQIQRDNYVKFLQSPDLKSIFEGKRKALFGIDILRKICNHPDLV
ERDILMHKKGYNYGAPEKSGKMQVVKALIELWKSQGHRSLLFCQTRQTMDILNRMIRGLDNFKFLVMDGTTPIGQRQTLV
DQFNDDTSIDLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAWRLGQTKDVFIYRLLTAGTIEEKIYHRQIF
KQFLTNKILQDPKQRRFFKMNDLHDLFTLDDGDDRSTETGRLFSGTERKIQSSSPSESEQEHNKSKSTAITSKKREQLKR
ENEDDFMQVASMSGVAGLEDFRDGDNENDGSDTKNNDENQDEDDRLITGLFSNSGVYSTLQHDSIMEGSHPDKVIIEREA
SRVAKQAAEALKQSRKLTRRAQIGVPTWTGKFGAAGKTGGIHRETPSPASRSRTSSPSPAISSSGTPISTGIRSRLFSKS
NDSTTSSSFNLLKNLREKRALELSASGPDINPEEKAPKSDEQKLESMRNYLLNSENHQAPSKDILMNCGMSLSGVQEVSN
VRQMLKEIAIWNGSKKVWKLKEEFE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005524 ATP binding

Cellular Component

None predicted.