Protein

MCA_00706_1

Length
616 amino acids


Browser: contigA:2204768-2206619+

RNA-seq: read pairs 1702, FPKM 34.1, percentile rank 56.3% (100% = highest expression)

Protein function

EGGNOG:0PJ1VFG07171.1degradation protein
SGD closest match:S000000402TAF5Transcription initiation factor TFIID subunit 5
CGD closest match:CAL0000173973CAALFM_CR04450CAChromatin modification protein

Protein alignments

%idAln lengthE-value
MIA_00199_161.11%5400.0MIA_00199_1
A0A0J9XAU0_GEOCN51.38%5430.0Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA07s02452g PE=4 SV=1
UniRef50_A0A0J9XAU051.38%5430.0Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XAU0_GEOCN
A0A060SYS9_BLAAD42.52%5489e-150ARAD1A19426p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A19426g PE=4 SV=1
A0A1E4TB64_9ASCO41.00%5394e-139Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_132560 PE=4 SV=1
A0A167EEN5_9ASCO40.18%5554e-136Glucose-induced degradation complex subunit GID7 OS=Sugiyamaella lignohabitans GN=GID7 PE=4 SV=1
Q6CD60_YARLI35.84%5582e-104YALI0C03520p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C03520g PE=4 SV=1
A0A1E3PUT4_9ASCO32.22%6306e-92WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49246 PE=4 SV=1
A0A1D8PSS1_CANAL25.69%2185e-18Chromatin modification protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR04450CA PE=4 SV=1
TAF5_YEAST27.06%2184e-16Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0061

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
1 100 200 300 400 500 616

Detailed signature matches

    1. PS50896 (LISH)
    1. SM00668 (ctlh)
    2. PS50897 (CTLH)
    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd00200 (WD40)
  2. mobidb-lite (disord...)

Residue annotation

  1. structural tetrad ...

Protein sequence

>MCA_00706_1
MKLETHTHSASSATLVADHASFSSNNTNLTKDPTTKDSNGTLPHTAFTAKKKSSKSSLNGPSPEINGTTYDNNIATNTTP
PSSYFGHNTTEVTRLILQSLYDLGYNDVAALLQKNSGLSTELPVVSSFRTAILLGHWDEAESLLPSLKIRPKTDITYLSF
LIRRQQFLELLESQDKEGALKILRTKLSTVPRYLIKSKTETSTTDDDNTNENKHVPTPEELQARRVQIAELSTLVMYSAQ
DITKTLSRDGARNHSRYYLLHALQELISPDMMIPRHRLARLLTQAQEFQLSRANYRISNPPFSLILDYPDDRSQFPTQTI
KKLTNHTDEVWFLNFSHNGKYLASGSKDCTVIVWRVSDWSIQSKFTGHKRGVVGIEWSPNDQMILTASQDRHACVFDPLT
GDSILDLNVHHDVVSACAWLPNSRYFFTASPDMMIYMWDLQGTQIDCWTCSRILAMSVTPNGKLLIAIDHNDTISFYNVA
AKRRIAIFKIGKMLSVTVSKDSRYALVNMESQEIHLWDLVSLRIVKKYNAQTEQLCNSMGQPVSFVLRSCFGGPEENLVL
CGDQNGNINIWNRETTNLIEVFSGHKGSVNCVRFNPQISNMFVSCGDDETIRIWGP

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.