Protein

MCA_00693_1

Length
990 amino acids


Gene name: SPT20

Description: Transcription factor SPT20

Browser: contigA:2174380-2177353-

RNA-seq: read pairs 769, FPKM 9.6, percentile rank 25.3% (100% = highest expression)

Protein function

Annotation:SPT20Transcription factor SPT20
KEGG:K11361SPT20 transcription factor SPT20
EGGNOG:0PMJISPT20conserved hypothetical protein
SGD closest match:S000005508SPT20Transcription factor SPT20
CGD closest match:CAL0000196043SPT20Transcription factor SPT20

Protein alignments

%idAln lengthE-value
MIA_01112_148.64%4035e-94MIA_01112_1
A0A0J9X9F9_GEOCN39.33%3893e-65Similar to Saccharomyces cerevisiae YOL148C SPT20 Subunit of the SAGA transcriptional regulatory complex OS=Geotrichum candidum GN=BN980_GECA05s07237g PE=4 SV=1
UniRef50_A0A0J9X9F939.33%3897e-62Similar to Saccharomyces cerevisiae YOL148C SPT20 Subunit of the SAGA transcriptional regulatory complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9F9_GEOCN
A0A060TBC8_BLAAD39.12%3867e-65ARAD1D34166p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D34166g PE=4 SV=1
A0A167FKI3_9ASCO36.04%3946e-64Spt20p OS=Sugiyamaella lignohabitans GN=SPT20 PE=4 SV=1
A0A1E3PCK4_9ASCO33.17%4079e-51Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_68093 PE=4 SV=1
SPT20_CANAL29.71%3772e-36Transcription factor SPT20 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SPT20 PE=1 SV=2
Q6CD38_YARLI62.37%931e-33YALI0C04070p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C04070g PE=4 SV=1
SPT20_YEAST30.74%2573e-24Transcription factor SPT20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT20 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5018

Protein family membership

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 700 800 900 990

Detailed signature matches

    1. PF12090 (Spt20)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00693_1
MPPTRLDRKRIVRDDDDMTASNGNPSSPQNNPATQGNSGSPVMSTAGNANVNNGMNAANQAQMMMLMRQQQQQQQAQMQQ
QQQQRTALGQQGIVAYPGLPPMITPHYKHYIKIMYESLTPTEKAQFQQLESQRQHQVLLARLRKYILQNPQVTATLAQGV
QALKAAQANQAQNAMNGMSAANIQVLRNAQLQQQQQLQNQKLQQQALLRQANPVPINGGVPFMGHQAGGRFYHFAETPET
ILKKYENESPSLILHIHPSHFRFGNQETVIPKNSPLMKMFFEYVANKAIPPAATEVFADSGIKYYEGNIILQIVDHRAIP
QTSDSHDENSDNKKKDGSTEKKDEEPVKTDPDKKEDGKEPDNQKTESPSTEVKKEGEGDGDKSENSTEDKGKGTTEGGNN
VNQQKVEPKVIRTVLRPTPLSMWHDMLYFTDFSQGLFTDQVTLNIESEILKHTRRNLDLTVPKNPYNSELAPILTYQRDV
IVNEYRKKNKRPWSEIKEELELREERRKAAAAAKAQDKMDLDEERPAKQLKHDADSLSHLSKQELLANYKFRKESLHPPR
RLHEDLMHHGSEYEELMLIMSDRPSSPGSTAASAQLMRLSFMEQVRKKFQNARMQQKYASQQQKIAAQARAVQVHAQQQQ
QQIQMNGQQSPTTFNGVGMTQQQQQLTRQQLLSIQIAAKQQQKQQQHYQNVINQNLPQQQQQQQPQQQPRPVNHMNQQNS
NINTPVMSNAASPINYGSNMASPAANSMSLNNTQPNNNPLTTPTLSNSQIPNGSVTPTSGMSMPNNTNSGMGSSPGTPNS
RGRGKATRARGKPTAIRGNSTRGRGKSRAGSVSTPGAGSPPSAAGSPIQSSMSINHHNVAGKTIPGNLMNNNNNGMVNGM
GLGNAAAGQAMRMGNNLMNANNNNVVNGHVNVSGKTLPGASRPTTVMMPQQQRPTMNLGFNNNANPNNNNNHAHVAGKTI
PGKTIPGQQQQQQQMLQQKQQFFSSLGGGE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003712 transcription cofactor activity
GO:0005515 protein binding

Cellular Component

GO:0000124 SAGA complex