Protein
MCA_00693_1
Length
990 amino acids
Gene name: SPT20
Description: Transcription factor SPT20
Browser: contigA:2174380-2177353-
RNA-seq: read pairs 769, FPKM 9.6, percentile rank 25.3% (100% = highest expression)
Protein function
| Annotation: | SPT20 | Transcription factor SPT20 | |
|---|---|---|---|
| KEGG: | K11361 | SPT20 | transcription factor SPT20 |
| EGGNOG: | 0PMJI | SPT20 | conserved hypothetical protein |
| SGD closest match: | S000005508 | SPT20 | Transcription factor SPT20 |
| CGD closest match: | CAL0000196043 | SPT20 | Transcription factor SPT20 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01112_1 | 48.64% | 403 | 5e-94 | MIA_01112_1 |
| A0A0J9X9F9_GEOCN | 39.33% | 389 | 3e-65 | Similar to Saccharomyces cerevisiae YOL148C SPT20 Subunit of the SAGA transcriptional regulatory complex OS=Geotrichum candidum GN=BN980_GECA05s07237g PE=4 SV=1 |
| UniRef50_A0A0J9X9F9 | 39.33% | 389 | 7e-62 | Similar to Saccharomyces cerevisiae YOL148C SPT20 Subunit of the SAGA transcriptional regulatory complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9F9_GEOCN |
| A0A060TBC8_BLAAD | 39.12% | 386 | 7e-65 | ARAD1D34166p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D34166g PE=4 SV=1 |
| A0A167FKI3_9ASCO | 36.04% | 394 | 6e-64 | Spt20p OS=Sugiyamaella lignohabitans GN=SPT20 PE=4 SV=1 |
| A0A1E3PCK4_9ASCO | 33.17% | 407 | 9e-51 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_68093 PE=4 SV=1 |
| SPT20_CANAL | 29.71% | 377 | 2e-36 | Transcription factor SPT20 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SPT20 PE=1 SV=2 |
| Q6CD38_YARLI | 62.37% | 93 | 1e-33 | YALI0C04070p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C04070g PE=4 SV=1 |
| SPT20_YEAST | 30.74% | 257 | 3e-24 | Transcription factor SPT20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT20 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5018
Protein family membership
- Transcription factor Spt20 (IPR021950)
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
900
990
Detailed signature matches
-
-
PF12090 (Spt20)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00693_1 MPPTRLDRKRIVRDDDDMTASNGNPSSPQNNPATQGNSGSPVMSTAGNANVNNGMNAANQAQMMMLMRQQQQQQQAQMQQ QQQQRTALGQQGIVAYPGLPPMITPHYKHYIKIMYESLTPTEKAQFQQLESQRQHQVLLARLRKYILQNPQVTATLAQGV QALKAAQANQAQNAMNGMSAANIQVLRNAQLQQQQQLQNQKLQQQALLRQANPVPINGGVPFMGHQAGGRFYHFAETPET ILKKYENESPSLILHIHPSHFRFGNQETVIPKNSPLMKMFFEYVANKAIPPAATEVFADSGIKYYEGNIILQIVDHRAIP QTSDSHDENSDNKKKDGSTEKKDEEPVKTDPDKKEDGKEPDNQKTESPSTEVKKEGEGDGDKSENSTEDKGKGTTEGGNN VNQQKVEPKVIRTVLRPTPLSMWHDMLYFTDFSQGLFTDQVTLNIESEILKHTRRNLDLTVPKNPYNSELAPILTYQRDV IVNEYRKKNKRPWSEIKEELELREERRKAAAAAKAQDKMDLDEERPAKQLKHDADSLSHLSKQELLANYKFRKESLHPPR RLHEDLMHHGSEYEELMLIMSDRPSSPGSTAASAQLMRLSFMEQVRKKFQNARMQQKYASQQQKIAAQARAVQVHAQQQQ QQIQMNGQQSPTTFNGVGMTQQQQQLTRQQLLSIQIAAKQQQKQQQHYQNVINQNLPQQQQQQQPQQQPRPVNHMNQQNS NINTPVMSNAASPINYGSNMASPAANSMSLNNTQPNNNPLTTPTLSNSQIPNGSVTPTSGMSMPNNTNSGMGSSPGTPNS RGRGKATRARGKPTAIRGNSTRGRGKSRAGSVSTPGAGSPPSAAGSPIQSSMSINHHNVAGKTIPGNLMNNNNNGMVNGM GLGNAAAGQAMRMGNNLMNANNNNVVNGHVNVSGKTLPGASRPTTVMMPQQQRPTMNLGFNNNANPNNNNNHAHVAGKTI PGKTIPGQQQQQQQMLQQKQQFFSSLGGGE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003712 transcription cofactor activity
GO:0005515 protein binding
Cellular Component
GO:0000124 SAGA complex