Protein

MCA_00658_1

Length
163 amino acids

Browser: contigA:2060244-2060736+

RNA-seq: read pairs 298, FPKM 22.5, percentile rank 44.5% (100% = highest expression)

Protein alignments

%idAln lengthE-value

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0126

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR000116
    High mobility group protein HMGA
    1. PR00930 (HIGHMOBLTYIY)
  2. SITE IPR017956
    AT hook, DNA-binding motif
    1. PR00929 (ATHOOK)
    2. SM00384 (AT_hook_2)
    3. PF02178 (AT_hook)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00658_1
MTQDSSLSSPTEPPKKGRGRPRKYPIGESPLELLQKARESGTLRKRGRPRKNPPSDDTNGSKTQYNNNNNNNSINSQEND
DDNDDNNNNDEEEEDEDEDEGNDTLENLISKANDSIDTSSSNNSEPAKRGRGRPKKTKLDTTTAPPPPPQPASKPRGRGR
PKK

GO term prediction

Biological Process

GO:0006355 regulation of transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding

Cellular Component

GO:0000785 chromatin
GO:0005634 nucleus