Protein

MCA_00631_1

Length
664 amino acids

Gene name: NDT80

Description: Meiosis-specific transcription factor Ndt80; in S. cerevisiae required for exit from pachytene and for full meiotic recombination

Browser: contigA:1961073-1963152-

RNA-seq: read pairs 550, FPKM 10.2, percentile rank 26.2% (100% = highest expression)

Protein function

Annotation:NDT80Meiosis-specific transcription factor Ndt80; in S. cerevisiae required for exit from pachytene and for full meiotic recombination
KEGG:K12769NDT80 meiosis-specific transcription factor NDT80
EGGNOG:0PI5ZMeiosis-specific transcription factor
SGD closest match:S000001166NDT80Meiosis-specific transcription factor NDT80
CGD closest match:CAL0000194121RON1Uncharacterized protein

Protein alignments

%idAln lengthE-value
A0A0J9XEE2_GEOCN48.22%2532e-77Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA12s00835g PE=4 SV=1
UniRef50_A0A0J9XEE248.22%2534e-74Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEE2_GEOCN
MIA_01390_147.97%2463e-77MIA_01390_1
Q5A6P1_CANAL30.40%2506e-30Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RON1 PE=4 SV=1
NDT80_YEAST29.21%2914e-22Meiosis-specific transcription factor NDT80 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NDT80 PE=1 SV=4
Q6CEL3_YARLI28.20%2662e-19YALI0B14773p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14773g PE=4 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1487

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 664

Detailed signature matches

  1. Domain IPR008967
    p53-like transcription factor, DNA-binding
    1. SSF49417 (p53-like ...)
  2. Domain IPR024061
    NDT80 DNA-binding domain
    1. PS51517 (NDT80)
    2. PF05224 (NDT80_PhoG)
    3. G3DSA:2.60.40...
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00631_1
MLRSSAGNNSLQNDPSKTSVSASKSPSHKAFMGFQLPEEPVEISSSQESTRVISDENTLTNRNKKSRTVRFAASSPNQLG
SDFDISDTPRKRNLPQDTGISSGAQTKRQKQILPNIHIPLRPSSTPQSSNSKIQYVSSAQAYNHKSSRERNLAQKKLPII
RIKLNNIQKAEPESLSSSMSPQNLSETSSEINQNSSFSDSIPSPTVKNNIFNDKGKGKGKTKPRLNNNENGSKFVSQSPS
GDDGFSEEEEYEEDSSNTGTANSQKTKKFFRIGPGMKRTCQNFHIVDPSGRQVYALIASRIDRGFHMGSAGWLTYRRNYI
TVSSSFSLTTNTRMEYGKVPQCHLYVCNGDSRLLIRSFALRITAFQIFSEDVLEEIPLIQHTPKRNKGFKKPPAIIPAVP
GLLPSHNFIQNNTTCRTMSRRIAVENLFTHPRKGLGTFVEYYPECENINHVVVFERIQFTTPSGGESNKCKLVVQLITTL
ENGVSYVAAWSETPPFSLRIRSPSSYSDSILHMGRSPSKNNQIKAFVNYSPGQQKSVVKLQNQENSQATEKSSDVNQFRP
IAPLIKPKDTASNSIFNPSPSSSSSLTSSFTSNQMTLNPIEISDSDDDNTNNPDNNSVSSNSDITEIQNPGTYSKSSASS
HANGTEYHVSVSDSSDDSDEVIIF

GO term prediction

Biological Process

GO:0006355 regulation of transcription, DNA-templated

Molecular Function

GO:0003677 DNA binding
GO:0003700 transcription factor activity, sequence-specific DNA binding

Cellular Component

None predicted.