MCA_00618_1
Gene name: SHH3
Description: Mitochondrial inner membrane protein SHH3
Browser: contigA:1895175-1895929+
RNA-seq: read pairs 20107, FPKM 1380.2, percentile rank 97.2% (100% = highest expression)
Protein function
| Annotation: | SHH3 | Mitochondrial inner membrane protein SHH3 | |
|---|---|---|---|
| KEGG: | K00236 | SDHC | succinate dehydrogenase (ubiquinone) cytochrome b560 subunit |
| EGGNOG: | 0PQYD | SDH3 | succinate dehydrogenase |
| SGD closest match: | S000004724 | SHH3 | Mitochondrial inner membrane protein SHH3 |
| CGD closest match: | CAL0000185815 | orf19.1480 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01385_1 | 57.32% | 164 | 1e-56 | MIA_01385_1 |
| A0A0J9X5V6_GEOCN | 57.14% | 133 | 3e-45 | Similar to Saccharomyces cerevisiae YKL141W SDH3 Subunit of succinate dehydrogenase and of TIM22 translocase OS=Geotrichum candidum GN=BN980_GECA03s03717g PE=4 SV=1 |
| UniRef50_A3LRN2 | 56.92% | 130 | 3e-37 | Succinate dehydrogenase n=31 Tax=Saccharomycetales TaxID=4892 RepID=A3LRN2_PICST |
| A0A1E3PR41_9ASCO | 53.79% | 132 | 6e-37 | Cytochrome b560 subunit of succinate dehydrogenase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_44608 PE=4 SV=1 |
| A0A060TH93_BLAAD | 49.06% | 159 | 3e-37 | ARAD1D28688p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D28688g PE=4 SV=1 |
| Q6C450_YARLI | 50.00% | 134 | 5e-34 | YALI0E29667p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E29667g PE=4 SV=2 |
| Q5ALU6_CANAL | 46.15% | 130 | 4e-32 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1480 PE=4 SV=1 |
| A0A1E4TGX9_9ASCO | 43.37% | 166 | 2e-28 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31811 PE=4 SV=1 |
| SHH3_YEAST | 41.80% | 122 | 1e-22 | Mitochondrial inner membrane protein SHH3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SHH3 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9892
Predicted cleavage: 36
Protein family membership
Domains and repeats
Detailed signature matches
-
-
SSF81343 (Fumarate ...)
-
-
-
PF01127 (Sdh_cyt)
-
-
-
-
PIRSF000178 (SDH_cy...)
-
-
-
PS01000 (SDH_CYT_1)
-
no IPR
-
CYTOPLASMIC_D... (C...)
-
-
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
-
cd03499 (SQR_TypeC_...)
Residue annotation
-
Iron-sulfur protei...
-
proximal quinone b...
-
proximal heme bind...
-
SdhD (CybS) interf...
Protein sequence
>MCA_00618_1 MLPTRVAPTLLRAATRVNTFGLRTACASMTGAYRSVATYKATQEKADEILKAQRANRPVSPHLEIYDFGMTMNLSALHRI TGVALAFSFYGFTLSYVLLPLVGIPIDAASLATAFGGLPVAAKLLAKAAAASPFAFHFWNGWRHLIWDTTAFVSKKGVYQ TGYTVIGLSLLSIIGLVLM
GO term prediction
Biological Process
GO:0006099 tricarboxylic acid cycle
Molecular Function
GO:0000104 succinate dehydrogenase activity
GO:0009055 electron carrier activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
Cellular Component
GO:0016020 membrane
GO:0045281 succinate dehydrogenase complex