Protein

MCA_00597_1

Length
239 amino acids

Browser: contigA:1837689-1838497-

RNA-seq: read pairs 588, FPKM 30.3, percentile rank 53.0% (100% = highest expression)

Protein function

EGGNOG:0PKSEFG01534.1GTP-Binding protein
SGD closest match:S000000833YPT31GTP-binding protein YPT31/YPT8
CGD closest match:CAL0000190363YPT31Rab family GTPase

Protein alignments

%idAln lengthE-value
MIA_01377_164.06%2565e-114MIA_01377_1
A0A060SXE1_BLAAD61.02%2362e-95ARAD1A08624p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A08624g PE=4 SV=1
A0A0J9X845_GEOCN51.51%2994e-91Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s07589g PE=4 SV=1
UniRef50_A0A0J9X84551.51%2998e-88Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X845_GEOCN
Q6C0M0_YARLI57.45%2359e-88YALI0F23529p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F23529g PE=4 SV=1
A0A1E4TJR2_9ASCO58.94%2071e-81Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_575 PE=4 SV=1
A0A1E3PSE2_9ASCO44.65%2712e-66Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_39645 PE=4 SV=1
A0A167BZI3_9ASCO52.78%1801e-61Rab family GTPase YPT1 OS=Sugiyamaella lignohabitans GN=YPT1 PE=4 SV=1
YPT31_YEAST37.02%2356e-48GTP-binding protein YPT31/YPT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPT31 PE=1 SV=3
A0A1D8PTI2_CANAL36.24%2292e-40Rab family GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YPT31 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0860

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 239

Detailed signature matches

  1. Family IPR001806
    Small GTPase superfamily
    1. PF00071 (Ras)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR005225
    Small GTP-binding protein domain
    1. TIGR00231
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. G3DSA:3.40.50...
  3. PR00449 (RASTRNSFRMNG)
  4. PS51419 (RAB)
  5. SM00173 (ras_sub_4)
  6. SM00174 (rho_sub_3)
  7. SM00175 (rab_sub_5)
  8. SM00176 (ran_sub_2)
  9. SM00177 (arf_sub_2)
  10. cd00154 (Rab)

Residue annotation

  1. Rab subfamily moti...
  2. G1 box cd00154
  3. GTP/Mg2+ binding s...
  4. Rab subfamily moti...
  5. Switch I region cd...
  6. G2 box cd00154
  7. Rab family motif 1...
  8. GDI interaction si...
  9. effector interacti...
  10. GEF interaction si...
  11. Rab family motif 2...
  12. G3 box cd00154
  13. Switch II region c...
  14. Rab family motif 3...
  15. Rab family motif 4...
  16. Rab family motif 5...
  17. Rab subfamily moti...
  18. G4 box cd00154
  19. G5 box cd00154

Protein sequence

>MCA_00597_1
MGSKSWDYIAKIVMIGDSACGKSSLTIRLTDDRFSQIHDVTIAAEIGSKTVQVGDKNEHMRLQIWDTAGQEHFRAVTRSY
FRNAAGCLLVYDVTRRSTFLHAKDWLEDILSQSDDNISICLVGNKTDLIEEENEAQAAGTQPKISPIKREVTFEEAQKWA
EENNLFTFVETSAKTGDNVVEAYSRVANDIYQKIVSGKFDLNDRSHGIKASAHKNNGNISTLTLDSANQNRSKSEGSCC

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003924 GTPase activity
GO:0005525 GTP binding

Cellular Component

None predicted.