Protein
MCA_00588_1
Length
771 amino acids
Gene name: MSS116
Description: ATP-dependent RNA helicase MSS116, mitochondrial
Browser: contigA:1807968-1810284-
RNA-seq: read pairs 4024, FPKM 64.4, percentile rank 70.7% (100% = highest expression)
Protein function
| Annotation: | MSS116 | ATP-dependent RNA helicase MSS116, mitochondrial | |
|---|---|---|---|
| KEGG: | K17679 | MSS116 | ATP-dependent RNA helicase MSS116, mitochondrial [EC:3.6.4.13] |
| EGGNOG: | 0PIW8 | MSS116 | ATP-dependent RNA helicase required for mitochondrial splicing of group I and II introns. Also required for efficient mitochondrial translation (By similarity) |
| SGD closest match: | S000002602 | MSS116 | ATP-dependent RNA helicase MSS116, mitochondrial |
| CGD closest match: | CAL0000195117 | MSS116 | ATP-dependent RNA helicase MSS116, mitochondrial |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00945_1 | 56.71% | 663 | 0.0 | MIA_00945_1 |
| A0A0J9XE20_GEOCN | 50.45% | 674 | 0.0 | Similar to Saccharomyces cerevisiae YDR194C MSS116 DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns OS=Geotrichum candidum GN=BN980_GECA11s02760g PE=3 SV=1 |
| UniRef50_A0A0J9XE20 | 50.45% | 674 | 0.0 | Similar to Saccharomyces cerevisiae YDR194C MSS116 DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XE20_GEOCN |
| A0A161HHJ6_9ASCO | 43.65% | 614 | 1e-136 | Mss116p OS=Sugiyamaella lignohabitans GN=MSS116 PE=3 SV=1 |
| A0A060T6E7_BLAAD | 37.85% | 650 | 4e-109 | ARAD1B11506p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B11506g PE=4 SV=1 |
| A0A1E3PDM4_9ASCO | 46.21% | 409 | 3e-96 | DEAD-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_14981 PE=4 SV=1 |
| MS116_YEAST | 38.51% | 470 | 7e-68 | ATP-dependent RNA helicase MSS116, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSS116 PE=1 SV=1 |
| Q6C2D3_YARLI | 35.87% | 460 | 3e-65 | YALI0F08833p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F08833g PE=4 SV=1 |
| MS116_CANAL | 31.77% | 469 | 1e-52 | ATP-dependent RNA helicase MSS116, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MSS116 PE=3 SV=2 |
| A0A1E4TJV7_9ASCO | 29.61% | 439 | 1e-37 | RNA helicase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_55755 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9788
Predicted cleavage: 51
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
700
771
Detailed signature matches
no IPR
Unintegrated signatures
-
-
cd00079 (HELICc)
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mobidb-lite (disord...)
Residue annotation
-
nucleotide binding...
-
ATP-binding site c...
Protein sequence
>MCA_00588_1 MLRLLSKAPRSSVVKATGGLFTFQQQSLNTLKASTAILSLRNFASTSLFQYEDRGSNRYNNNNNGGYQNNNNGGYNNNNN NGGYRNNNKNRFSNDRRGGAKFSRNRKGNGATNFDSSRNNASARGSEGDGLRGMEDYERNTDLSNVDLNQIAKEAQTGTE QESNPPANKNDFSLVNTELLGEHKILSRVLVNSLLYNRKYEHLTKVQSQTMIPILRGESVVVKAKTGTGKTAAFSVPTIQ FVLDALKEEEANSDLMPKDSHKTLYGASGTVKAIIISPTRELAQQIADEITAITAYGEMRKISTVCMVGGVPKIPQLRHA FQRQRCADIIVATPGRLYDVLQEPGLEKFFADVKIKVLDEADRLLDIGFSRELEQIDEVLINLSKGAQKYQTLLFSATID KRVRDFARMELGARAKVVDTVPKDEPEAHALVDQSIVVCQNWKEIYPAAYLEITKALKRHLEFSESLPYEERKPFKGIVF MPTVPTVSHYHDVLKSAFKMAQKSLGIRESKGLIPRVYTIHGQMSQGARQRAADDFKKLKEPVLLVTTDVVARGMDFPNV TNVFQMGTPRDAASYVHRIGRTGRIGHRGEACMIMTKDELPYLRLLGQKNIKIENLRQFKHSDVKITQEQIEGAEEPEKS ITDTDAFYSALDLVDLDAEESIRLIEGLLSSYAYMRRDFGVNGVEFLKKNEAFATELFKLQDHVWSRKLYESWGASNQRR GGYWNGSNRRESSFAQRGFNNNKSSANYRRANFNDDDFRAYEPRSNSRRRF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0005524 ATP binding
Cellular Component
None predicted.