Protein
MCA_00586_1
Length
202 amino acids
Gene name: SDC1
Description: COMPASS component SDC1
Browser: contigA:1805449-1806179-
RNA-seq: read pairs 564, FPKM 34.3, percentile rank 56.5% (100% = highest expression)
Protein function
| Annotation: | SDC1 | COMPASS component SDC1 | |
|---|---|---|---|
| EGGNOG: | 0PTFD | SDC1 | COMPASS complex subunit Sdc1 |
| SGD closest match: | S000002877 | SDC1 | COMPASS component SDC1 |
| CGD closest match: | CAL0000182262 | SDC1 | Sdc1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00947_1 | 56.76% | 74 | 4e-23 | MIA_00947_1 |
| A0A0J9XDE1_GEOCN | 55.36% | 56 | 6e-16 | Similar to Saccharomyces cerevisiae YDR469W SDC1 Subunit of the COMPASS (Set1C) complex OS=Geotrichum candidum GN=BN980_GECA11s02787g PE=4 SV=1 |
| UniRef50_A7TDQ5 | 44.44% | 63 | 9e-12 | Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) TaxID=436907 RepID=A7TDQ5_VANPO |
| A0A060SYY5_BLAAD | 60.47% | 43 | 1e-14 | ARAD1C01034p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C01034g PE=4 SV=1 |
| Q6CFL6_YARLI | 59.52% | 42 | 1e-13 | YALI0B05830p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B05830g PE=4 SV=1 |
| A0A1E4TDW6_9ASCO | 52.27% | 44 | 5e-13 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1675 PE=4 SV=1 |
| SDC1_YEAST | 45.10% | 51 | 5e-10 | COMPASS component SDC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDC1 PE=1 SV=1 |
| A0A1D8PNX3_CANAL | 44.44% | 45 | 5e-09 | Sdc1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SDC1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1138
Predicted cleavage: 39
Protein family membership
None predicted.
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF05186 (Dpy-30)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MCA_00586_1 MTTDSAASSPAPGSSNNNTQQSSSTSTAYLQNAASNRNGVGLGNSKDGAFTRKWFNQEVTPLLLEGMRYLAREKPVDPIM ALGQFLISHAEKRHNNAVTAVNAVISASANENDEQEDQIMEEIDGNNTNKQQQETVSDNTQTEIATNETNLSNRQETDEQ ASNNQTTTTTNDDKNSTNIQTEQVSAQDNNNQTSSLSNNPTV
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.