Protein
MCA_00577_1
Length
968 amino acids
Gene name: NSI1
Description: RNA polymerase I termination factor; Myb-like DNA-binding protein
Browser: contigA:1776038-1778945-
RNA-seq: read pairs 2167, FPKM 27.6, percentile rank 50.4% (100% = highest expression)
Protein function
| Annotation: | NSI1 | RNA polymerase I termination factor; Myb-like DNA-binding protein | |
|---|---|---|---|
| EGGNOG: | 0PKPT | REB1 | Dna-binding protein |
| SGD closest match: | S000002433 | NSI1 | RNA polymerase I termination factor |
| CGD closest match: | CAL0000184035 | orf19.5722 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03569_1 | 64.00% | 275 | 1e-123 | MIA_03569_1 |
| A0A0J9XDA4_GEOCN | 58.72% | 281 | 3e-116 | Similar to Saccharomyces cerevisiae YBR049C REB1 RNA polymerase I enhancer binding protein OS=Geotrichum candidum GN=BN980_GECA10s02122g PE=4 SV=1 |
| UniRef50_A0A0J9XDA4 | 58.72% | 281 | 6e-113 | Similar to Saccharomyces cerevisiae YBR049C REB1 RNA polymerase I enhancer binding protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XDA4_GEOCN |
| A0A1E3PMD5_9ASCO | 55.73% | 262 | 2e-97 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_65156 PE=4 SV=1 |
| A0A060TCP2_BLAAD | 53.03% | 264 | 1e-94 | ARAD1D37686p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D37686g PE=4 SV=1 |
| Q6C0Z8_YARLI | 52.04% | 269 | 3e-86 | YALI0F20460p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F20460g PE=4 SV=1 |
| A0A167DHG0_9ASCO | 48.84% | 258 | 5e-84 | Nsi1p OS=Sugiyamaella lignohabitans GN=NSI1 PE=4 SV=1 |
| A0A1E4TMH5_9ASCO | 46.58% | 234 | 2e-65 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_64110 PE=4 SV=1 |
| NSI1_YEAST | 37.85% | 325 | 2e-62 | RNA polymerase I termination factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSI1 PE=1 SV=1 |
| A0A1D8PQ76_CANAL | 45.71% | 175 | 2e-47 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5722 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0381
Predicted cleavage: 19
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
1
100
200
300
400
500
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700
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968
Detailed signature matches
no IPR
Unintegrated signatures
-
-
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PF13921 (Myb_DNA-bi...)
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cd00167 (SANT)
-
mobidb-lite (disord...)
Residue annotation
-
DNA binding site c...
-
DNA binding site c...
Protein sequence
>MCA_00577_1 MPELRNLSNILTLQSSRWGVQPKIHATSDNEDDLKSPNSDSDPKIDTKPHAEDSQQESGDGKLQSKDTDKESTDQQHIIS EQDWSEIQQVPWNDMERDGVALEHPQEQEETHKGNEDQNSQPLIEQTSPAQDMELPTEEEGLQTQEEIEPNNSTSEFSNA VEHSSPPPKAGGDKLGAEALLDLGKQNSNKTEEKTDYEEQERQQEQEDSVTSHSHYTDPQDAVAVAVAVAAVANANNQEE STSKPKTKGRQKRSNSDEFNSLSKDGENANKRTANGSSNKRQKRSDSTSLTSATSELDESHTSNSNMEADLHLQELFTGT ENPNWQRFYAESINDDDKSAPVDLNMLINSTTPRKPTSRRGRKPKSTNNQRLSPQPVPISSNSNVDPALEQLDISSAAAD PDGSNVNDSAVLSREMSQLEDAMMHASAIARSLASSGHSNHNPVYDDSLKADNQHASGAKPLSVDGKDPNVDGEIPLEDI KLSHDIATESEMKYWQQQENSGNLPVIANNANKKRKRRNSSQSINGSLPDRESGSHSEEDSVHNSKMDNGSDILMMLDDL PQNLPSGSGGNFVPEEVCRIDQFMQKYCEVHHLTREELCQRVWSNNRKKDRFWDFAAEVLPHRTRASIYKHIRRAYHVFK ARGKWTPEEDQTLRALYEEKGPQWKVIGLTMYRMPEDCRDRWRNYVKCGEKRVSNKWSTEEELQLTQIVTDLRNEFPDQE INWTLVSERMGGIRSRIQCRYKWNKLTLRCIISKVDAMMHTDRLSLLKYIRDNGYEEESQIDWDGFAAMDSRGFWSGKEL KIAFDRIKPKYTNKPFRNIVEDLCNQYAAFEQHQPNENNQFDTDTAAKAVVVSSEDAAAAVAVSAAAAVGASELVAESRS LGTSVSSEFTPNLAEANSNTSNTSANPTTTATTATVESNGNTELEKNGEDNNDESCIEPIIKNVSMNFGEDSSSNHLQKL KEEAQPEI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
Cellular Component
None predicted.