Protein

MCA_00558_1

Length
446 amino acids

Gene name: PEX13

Description: Peroxisomal membrane protein PAS20

Browser: contigA:1735721-1737062-

RNA-seq: read pairs 1722, FPKM 47.6, percentile rank 64.4% (100% = highest expression)

Protein function

Annotation:PEX13Peroxisomal membrane protein PAS20
KEGG:K13344PEX13 peroxin-13
EGGNOG:0PFZYPEX13peroxisomal membrane protein
SGD closest match:S000004181PEX13Peroxisomal membrane protein PAS20
CGD closest match:CAL0000182663PEX13Peroxin

Protein alignments

%idAln lengthE-value
MIA_00414_171.78%2875e-129MIA_00414_1
A0A0J9X885_GEOCN66.80%2446e-107Similar to Saccharomyces cerevisiae YLR191W PEX13 Integral peroxisomal membrane protein required for translocation of peroxisomal matrix proteins OS=Geotrichum candidum GN=BN980_GECA05s00571g PE=4 SV=1
A0A161HJN8_9ASCO62.81%2421e-99Pex13p OS=Sugiyamaella lignohabitans GN=PEX13 PE=4 SV=1
A0A060T2L6_BLAAD63.45%2382e-93ARAD1A02442p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A02442g PE=4 SV=1
Q6CCX4_YARLI58.78%2453e-89YALI0C05775p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C05775g PE=4 SV=1
A0A1E3PRG7_9ASCO54.88%2464e-89Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7275 PE=4 SV=1
UniRef50_A0A1E3PRG754.88%2461e-85Uncharacterized protein (Fragment) n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3PRG7_9ASCO
A0A1E4TCS7_9ASCO55.28%2461e-87Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_13627 PE=4 SV=1
PEX13_YEAST50.41%2462e-71Peroxisomal membrane protein PAS20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX13 PE=1 SV=1
A0A1D8PTW0_CANAL43.48%2532e-57Peroxin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PEX13 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0007
Predicted cleavage: 148

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 446

Detailed signature matches

  1. Domain IPR007223
    Peroxin 13, N-terminal
    1. PF04088 (Peroxin-13_N)
  2. Domain IPR001452
    SH3 domain
    1. SM00326 (SH3_2)
    2. PF14604 (SH3_9)
    3. SSF50044 (SH3-domain)
    4. PR00452 (SH3DOMAIN)
    5. PS50002 (SH3)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. G3DSA:2.30.30.40
  3. NON_CYTOPLASM... (N...)
  4. TRANSMEMBRANE (Tran...)
  5. cd11771 (SH3_Pex13p...)
  6. mobidb-lite (disord...)

Residue annotation

  1. putative Pex5p bin...
  2. peptide ligand bin...

Protein sequence

>MCA_00558_1
MTSVQRPKPWEVSSGTSLASTTANNSAMSTATTPAASAASSASSTTTSTSSSTTAPEIPSRPTSLTTATPTSTYSPYGAT
TTGYGSTYGSGLGTYGSGIGSYGSGLGSYGGGYGGYGSYGGYGSGYGGYGSGYGGGYGGYGSPYSRFGGGAGMMGGDPNN
PNSFQNNTMATFQLIESIVGAFAGFSQMLESTYMATHSSFFAMMSVAEQFGHLKNSLGSILGIFAVLRWLKKLVAKITGN
SKSLEVAQSKKIAKSLNPSEFAKFQISNSPNKPPRPSFKPLVFFLAAVFGFPYLLNKLIHAMADQQQHQHEMMLDEHGNP
RMLIDPASNQPIDPSNLEFCRALYDFVPENPQIELELKRGDLIAIIAKEDPTGKPSQWWRVRTRDGRSGYVPSTYVEIIP
RRIEEIRDEPSLVGAEQTPLTNDLKQNDELMKQKTAEEFQRQGIQS

GO term prediction

Biological Process

GO:0016560 protein import into peroxisome matrix, docking

Molecular Function

GO:0005515 protein binding

Cellular Component

GO:0005777 peroxisome
GO:0016021 integral component of membrane