Protein

MCA_00521_1

Length
564 amino acids

Gene name: MEX67

Description: mRNA export factor MEX67

Browser: contigA:1630155-1631850-

RNA-seq: read pairs 1528, FPKM 33.4, percentile rank 55.6% (100% = highest expression)

Protein function

Annotation:MEX67mRNA export factor MEX67
KEGG:K14284NXF nuclear RNA export factor
EGGNOG:0PK9NMEX67mRNA export factor MEX67
SGD closest match:S000006090MEX67mRNA export factor MEX67
CGD closest match:CAL0000181331MEX67mRNA export factor MEX67

Protein alignments

%idAln lengthE-value
MIA_01081_155.25%5430.0MIA_01081_1
A0A0J9XDP0_GEOCN52.58%5420.0Similar to Saccharomyces cerevisiae YPL169C MEX67 Poly(A)RNA binding protein involved in nuclear mRNA export OS=Geotrichum candidum GN=BN980_GECA11s00296g PE=4 SV=1
UniRef50_A0A0J9XDP052.58%5420.0Similar to Saccharomyces cerevisiae YPL169C MEX67 Poly(A)RNA binding protein involved in nuclear mRNA export n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XDP0_GEOCN
A0A167CLE9_9ASCO45.87%5691e-159Mex67p OS=Sugiyamaella lignohabitans GN=MEX67 PE=4 SV=1
A0A060T4E9_BLAAD43.96%5553e-154ARAD1A16588p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A16588g PE=4 SV=1
A0A1E3PQQ5_9ASCO43.12%5524e-149NTF2-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50063 PE=4 SV=1
Q6CGM7_YARLI42.64%5303e-143YALI0A18007p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A18007g PE=4 SV=1
A0A1E4TG61_9ASCO37.24%5215e-103Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_26747 PE=4 SV=1
MEX67_YEAST32.44%5981e-82mRNA export factor MEX67 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MEX67 PE=1 SV=1
MEX67_CANAL32.55%5993e-81mRNA export factor MEX67 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MEX67 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0720

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Repeat
  3. Repeat
1 100 200 300 400 500 564

Detailed signature matches

  1. Domain IPR032675
    Leucine-rich repeat domain, L domain-like
    1. SSF52058 (L domain-...)
    2. G3DSA:3.80.10.10
  2. Domain IPR032710
    NTF2-like domain
    1. SSF54427 (NTF2-like)
  3. Domain IPR002075
    Nuclear transport factor 2
    1. PF02136 (NTF2)
  4. Domain IPR018222
    Nuclear transport factor 2, eukaryote
    1. PS50177 (NTF2_DOMAIN)
  5. Domain IPR009060
    UBA-like
    1. SSF46934 (UBA-like)
  6. Domain IPR005637
    TAP C-terminal (TAP-C) domain
    1. PF03943 (TAP_C)
    2. cd14342 (UBA_TAP-C)
    3. PS51281 (TAP_C)
    4. SM00804 (TAP_C_cls)
  7. Repeat IPR001611
    Leucine-rich repeat
    1. PS51450 (LRR)
  8. Repeat IPR025875
    Leucine rich repeat 4
    1. PF12799 (LRR_4)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.8.10
  2. G3DSA:3.10.45...
  3. mobidb-lite (disord...)

Residue annotation

  1. peptide binding si...

Protein sequence

>MCA_00521_1
MYNNRGHRRNNNGGGFGFNENNNNGYQNPLSARIGNNNDVHVEFRNWQGGSRDNLVDFIYRKSQIRLRNVRVSGPVLHAD
VSYPDARPLAKYHGIRFAGASLDIRVFDDNNKNSSSGNNGGPSPSTRTTIQLLEEFLNSRYNTETKYLNLESLRNDEFLV
AKGLYSSSKMFPALMKIAGERIPDVQSVSLRDNSLIDVSTIISLPATYPNLKNLSLADNNITSIQSLEAFKHKLPHLREL
ILSGNMITNSLSYKDDMIKLFPRLVVLDGQVVQDESQIDKLKLPIQTKNNFFENDSISEIAASFLQSFFDRYDKNRADLI
QLYDEQSTFSINLNTASPRQLGGTGVPTLPGTWKEYIPLSRNLLKVNSPNAQLTRLCVGPEAIAKTFQRLPPTNHEFSGP
EKFAVDVWNVKDIRALGDQGIMIFVHGEFREPDNALRSFDRNFILLPGPYNNMIVTSDILTIRPYSGVDGWKELPLDTAS
SVSNTPVPAVPGMSSISSATDLNLLDALPPQQKLVVRTLMEKTRLNTQFALMCAEQAQFDLQNALQLFEQSKLQNTIPPN
AFIP

GO term prediction

Biological Process

GO:0006810 transport
GO:0051028 mRNA transport

Molecular Function

GO:0005515 protein binding

Cellular Component

GO:0005622 intracellular
GO:0005634 nucleus