MCA_00490_1

Browser: contigA:1546085-1551065+

RNA-seq: read pairs 28, FPKM 0.2, percentile rank 4.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0157

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 1,659

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   550 - 769

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   908 - 1,513

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_00490_1
MIGKSTLATVVALLSVQGAVAHPAVNSDEIPTAVSVENAAITYKPQKLNTEGYDECLDYCAAAVALVDEKNACSSSDEDS
FYNVVQKCLKCACTIKNTFPDNDKLFAGLEKCDIPVHDCFYQAPLPDELDPTELEKRTFGLFGKIKGKIKNKINKVVDAF
YPKKNYYYYYTTYHPKPTCPYTCANGYQSSVYWVPAKNYYHSTYYNGYYCYVYPACYYPGYYVTLPPCSTRYTITSTRTR
RTSQYGCYPAYTSTVQYVPGENYPVSRVTYGNYVTVYPAQNFPAYYVTRTACYTRQTRYVYPPPQATPDLSCAPGTEPSA
TTVYGSNVPQRTVTGNDNYVTITYGTSYPDRVFTVPPCDTKTTTTIEPSIPVPQVPTCAEGFTSSTFIVDGTTIQGRTVT
RGNVVIVYKPTAVAGSTTVIPPCETATTTTITRTRETPDITCAPGYESDTVTFPGTTFSASTRSEDGTVTVYIPVTFPAI
TTTVPACETVKTTYITRTIETPETTCATGYETETITIPGTTLTASTASKPGTITVYVPVTVPPFTVVLPPCSDKPSSQPP
ASESTQPPASESTEPPASESTQPPAGSSSQPPASESSQPPASESSQPPASESTQPPASESTEPPASESTQPPAGSSSQPP
ASESSQPPASESTEPPASESTQPPAGSSSQPPASESSQPPASESSQPPASESTQPPASESTEPPASESTQPPAGSSSQPP
ASESSQPPASESSQPPASESSQPPASESSQPPAGSSTTPDVPDLTTTTITRTREPYTYCIPNADITFTIVLPGNWLGGST
TTSGNTVTVYPPVQFPPTPVAITPCSTTTESTAVSSSSVIVSTTTPVGGTTTTVTRTREEIITCAPDNTNSVTFTLPALT
LSGSTTTNSDNAVTVFVPVTIPPLSTVVPPCPVSEPPASESSQPPASESSQPPASESSQPPASESSQPPASESSQPPAGS
SSQPPNGQVTTTVPYPPPTATEPCVEGTNSKPITVPGTSYPGTTVTGDDNTVTVRPPTSFPPTTPMLPGCTPPASGESSQ
PPASESTQPPASESTQPPASESTEPPANESTEPPASESSQPPASESSQPPAGSSSQPPNGQVTTTVPYPPPTATEPCVEG
TNSKPITVPGTSYPGTTVTGDDNTVTVRPPTSFPPTTPMLPGCTPPAGGESSQPPAGPSSEVTTPTGILPSVTSSQPPAS
ESTQPPASESTEPPASESTQPPATESTEPPATESTEPPASESTQPPASESTEPPAGSSSQPPASESTQPPASESTQPPAS
ESSQPPATESTQPPAGSSSQPPASESSQPPASESTQPPASESTEPPASESTQPPASESTEPPAGSSSQPPASESTEPPAS
ESTQPPAGSSSQPPASESSQPPASESTQPPASESTQPPASESTQPPASESTEPPAGSSSQPPASESTEPPASESTQPPAG
SSSQPPASESSQPPASESTQPPASESTEPPAGGSTQPPSGTATTPGTGSSTTEGPSPTTTTPPTKTTSTNCPAGTCTCTP
TPPVCLNYDIYKAFYCGEWILYKVCTTYGLMGCGYEYLDTTSAGNKSKRAEATIAVEEILQPSSVVTLDPLPTQVAENIV
EADKEENVKAILEEVKDEVPEDVKIVDAKDIDFSLLESIQKVKQVDQLEKVAEFIPADA

GO term prediction