Protein

MCA_00481_1

Length
914 amino acids

Gene name: CTF18

Description: Chromosome transmission fidelity protein 18

Browser: contigA:1510050-1512795-

RNA-seq: read pairs 438, FPKM 5.9, percentile rank 19.0% (100% = highest expression)

Protein function

Annotation:CTF18Chromosome transmission fidelity protein 18
KEGG:K11269CTF18 chromosome transmission fidelity protein 18
EGGNOG:0PG1BFG05326.1Chromosome transmission fidelity protein
SGD closest match:S000004683CTF18Chromosome transmission fidelity protein 18
CGD closest match:CAL0000185954CTF18Ctf18p

Protein alignments

%idAln lengthE-value
MIA_05914_144.63%9500.0MIA_05914_1
A0A0J9XK65_GEOCN37.17%7561e-140Similar to Saccharomyces cerevisiae YMR078C CTF18 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion OS=Geotrichum candidum GN=BN980_GECA21s01308g PE=4 SV=1
UniRef50_A0A0J9XK6537.17%7562e-137Similar to Saccharomyces cerevisiae YMR078C CTF18 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C and is required for sister chromatid cohesion n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XK65_GEOCN
A0A167FJY6_9ASCO39.43%5967e-127Ctf18p OS=Sugiyamaella lignohabitans GN=CTF18 PE=4 SV=1
A0A060TFE8_BLAAD31.47%8043e-109ARAD1D22638p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D22638g PE=4 SV=1
A0A1E3PNV8_9ASCO38.03%5472e-112p-loop containing nucleoside triphosphate hydrolase protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_4830 PE=4 SV=1
CTF18_YEAST30.10%7645e-96Chromosome transmission fidelity protein 18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTF18 PE=1 SV=1
A0A1E4TGU0_9ASCO34.39%5035e-85Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2650 PE=4 SV=1
Q5A889_CANAL25.87%8045e-51Ctf18p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CTF18 PE=4 SV=1
Q6C7Z4_YARLI26.41%4962e-40YALI0D24123p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D24123g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0339

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 914

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR003593
    AAA+ ATPase domain
    1. SM00382 (AAA_5)
  3. Domain IPR003959
    ATPase, AAA-type, core
    1. PF00004 (AAA)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.8.60
  3. G3DSA:3.40.50...
  4. cd00009 (AAA)
  5. mobidb-lite (disord...)

Residue annotation

  1. Walker A motif cd0...
  2. ATP binding site c...
  3. Walker B motif cd0...

Protein sequence

>MCA_00481_1
MDFSSYRRPGSLGPSLFDNAPVDITSFSTAGQSSSGSNGLDATNYDALDLSFSKSIFSRAAKTTISAKTSEGFSITLKKK
KPQSLKKPSNDQYSHVEDMQQLEVDVNERNPGGKLNEFDDRNQFGIPIYQFKLELEKRKKEKQLQEDRDQLLRERISKHN
DEDIQVMDSQPSSAKKDCTLLTEKYRPEKWIDLVGPEKTHRRLLKWLRHWSPLVFDTPGPTFKNNYNGNNNFSNKSDFVD
VLSRPQKKILLIHGPPGIGKTTVAHVIANQAGYDVLEINASDERSASTVKDRIGSAVSSYRLSQSNKPVCIVADEIEGAA
ESGFIKALVDLITADARACSQIERWYGTEAKTNKLSPKEILGKLRKSNSQHMDEVSNSINKRRKANKTTPGKILNALLMR
PIIAVCNDAYASSLKMLRPYAEIVPYHKVSPYTLVDTLQQICTKEDLDISAKELTQIAIDSECDLRSCLNSLQFGYTKKS
DIEKMGLKDQLLLRETPAMSCSKKDTSKSWSSVVLQLFQQRRGISVKSGTSNGIRNKTQESQILLREVLSCGEFDRMVTG
AFLAYPHMEYHDDLFKKPVQFGDWLFFHDSINKGVYQNQHSALAEYYPYSSMASYTLFSNINNNNKSFYGDSAISLSEHE
YFEKLRENKDLINSFFKTCFTNSPSLLQSINKMDFVIEILPNILSMVNPDFPNINSSFYSTSNGSIVDSEGDFRSDKIGH
TIEILRSYGMRYISHTVDNTSSASDQRGAGGLTFILDPPIERVAIFDERERQLASVGKFSIRQTINTEIAKLESSLASEK
SQKRDLLSDEEVDDDEYNVSEKRQKLSNDEDLNPRHSRLSSTIKTKASSGGLFDFSFSKVTGDKKPAEKEKEEEKKKQKQ
ISSDAKSHERIWIQYNEGLSNAVRRNLTWAGLWL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005524 ATP binding

Cellular Component

None predicted.