Protein
MCA_00471_1
Length
476 amino acids
Browser: contigA:1480085-1481755-
RNA-seq: read pairs 828, FPKM 21.4, percentile rank 43.2% (100% = highest expression)
Protein function
| KEGG: | K11866 | STAMBP | STAM-binding protein [EC:3.4.19.12] |
|---|---|---|---|
| EGGNOG: | 0PIV2 | FG10961.1 | endosome-associated ubiquitin isopeptidase (AmsH) |
| SGD closest match: | S000001900 | RPN11 | Ubiquitin carboxyl-terminal hydrolase RPN11 |
| CGD closest match: | CAL0000177137 | orf19.7264 | Proteasome regulatory particle lid subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XEW7_GEOCN | 46.03% | 478 | 1e-130 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA13s02683g PE=4 SV=1 |
| UniRef50_A0A0J9XEW7 | 46.03% | 478 | 2e-127 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEW7_GEOCN |
| MIA_00632_1 | 52.34% | 384 | 1e-127 | MIA_00632_1 |
| A0A060T5L2_BLAAD | 41.58% | 469 | 3e-117 | ARAD1B07590p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B07590g PE=4 SV=1 |
| Q6CDI9_YARLI | 36.50% | 474 | 5e-90 | YALI0C00165p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C00165g PE=4 SV=1 |
| A0A167C9K1_9ASCO | 63.08% | 195 | 3e-88 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_4208 PE=4 SV=1 |
| A0A1E3PNR9_9ASCO | 36.36% | 473 | 1e-85 | JAB1/MPN domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81676 PE=4 SV=1 |
| A0A1E4TKB3_9ASCO | 59.78% | 184 | 5e-78 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_22685 PE=4 SV=1 |
| A0A1D8PFZ8_CANAL | 38.71% | 62 | 5e-09 | Proteasome regulatory particle lid subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7264 PE=4 SV=1 |
| RPN11_YEAST | 35.94% | 64 | 6e-09 | Ubiquitin carboxyl-terminal hydrolase RPN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4916
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
450
476
Detailed signature matches
-
-
PF08969 (USP8_dimer)
-
no IPR
Unintegrated signatures
-
-
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SSF102712 (JAB1/MPN...)
-
SSF140856 (USP8 N-t...)
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cd08066 (MPN_AMSH_like)
-
mobidb-lite (disord...)
Residue annotation
-
MPN+ (JAMM) motif ...
-
Distal ubiquitin r...
-
Proximal ubiquitin...
-
Zinc-binding site ...
Protein sequence
>MCA_00471_1 MLVKPKSTKELAREGSIVLDHLPQITFYQWLNLARSVLIQADTYYRENDFENAYTLYSRYASIVLELLPEHPEANKPAFA AQNRRIRESTISVLEKMEAIKPIIEQRVAAYDREMAKRAQRDQKMQHEKHKQLELQHREYVRRQSQIISDEEHRKTVRDI QELQKSLQANDKPTSSNSALNHTLASPQQNSKYHSHIPSYPSANYKASPIPKFDLKPLTPDVGKIPPELPQKPTIPQFQK HDIPSSSSEHERLTSLPQLTAPSPPPKQITPEPVSDQKPEITNKIRVTTEGGEPLRTIFLPERLRQEFLAIAEQNTRNKL ETCGMLCGKLNRNAFFITKLVIPHQESTPDTCATIHEEILFEYLDTNDLILIGWIHTHPTQSCFMSSVDLHTQNSYQIML KESIAIVCAPTKSPSWDIFRLTDPTGMGIIRKCMKSSFHPHPEPDLYRSALAKSHVVLTRDIPFQIEDLRKIKPEQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.