Protein
MCA_00465_1
Length
422 amino acids
Browser: contigA:1464006-1465525-
RNA-seq: read pairs 4898, FPKM 143.1, percentile rank 84.3% (100% = highest expression)
Protein function
| KEGG: | K18749 | LSM14 | protein LSM14 |
|---|---|---|---|
| EGGNOG: | 0PR3C | G2 M phase checkpoint control protein Sum2 | |
| SGD closest match: | S000006333 | SCD6 | Protein SCD6 |
| CGD closest match: | CAL0000176560 | orf19.6250 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00647_1 | 76.62% | 77 | 2e-35 | MIA_00647_1 |
| A0A0J9X3F9_GEOCN | 71.43% | 77 | 1e-32 | Similar to Saccharomyces cerevisiae YPR129W SCD6 Repressor of translation initiation OS=Geotrichum candidum GN=BN980_GECA02s03915g PE=4 SV=1 |
| UniRef50_A0A0J9X3F9 | 71.43% | 77 | 2e-29 | Similar to Saccharomyces cerevisiae YPR129W SCD6 Repressor of translation initiation n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3F9_GEOCN |
| A0A060SYY6_BLAAD | 67.53% | 77 | 7e-32 | ARAD1C04576p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C04576g PE=4 SV=1 |
| Q6C957_YARLI | 65.38% | 78 | 2e-30 | YALI0D13838p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D13838g PE=4 SV=2 |
| A0A1E3PJB5_9ASCO | 62.03% | 79 | 4e-26 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50793 PE=4 SV=1 |
| Q5AAR2_CANAL | 54.32% | 81 | 4e-23 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6250 PE=4 SV=1 |
| SCD6_YEAST | 47.44% | 78 | 1e-17 | Protein SCD6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCD6 PE=1 SV=1 |
| A0A167EXV5_9ASCO | 59.21% | 76 | 1e-08 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_2188 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2239
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
350
422
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
Sm1 motif cd01736
-
putative RNA bindi...
-
Sm2 motif cd01736
Protein sequence
>MCA_00465_1 MAHFLGKTISLISNSDIRYVGVLHEINAKDSTVSLRHVRSYGTESRRTGADAVPPSSNVYQFIVFKGSDVKDLTVSDEPP IPEQPPMQQPAQTVSQPAPPQVQQQNTYNQYYAGGQASSNPYGMGYGQMPPIPQTSSTPVARELSPQIQKIPTPAPQPSA SQTSLTQPASTVTPSQQIPTPSSQTVPTSVSQIPHSTKPEEPKLTEEEKPKAQTEQSKPEEKPEASETETKQIPKAPYTQ TKPLPQGPANRGQGNRYNSNPRPVETSDFDFDEMNSKFSKAEIAAEIESSVEPKSSFYDKKSSFFDNISSTTKERIEGSE EPRKRGEERRLNEETFGQDYVFRNGRGGYRGRGRGGRGRGRGGYYRGRGGNNQSDSYRGYNNNNGYNNNNSYNPNNAYNN YRNKNNGYNNDNTGNGSNSFAN
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.