Protein

MCA_00424_1

Length
654 amino acids

Browser: contigA:1336970-1338935+

RNA-seq: read pairs 878, FPKM 16.6, percentile rank 36.3% (100% = highest expression)

Protein alignments

%idAln lengthE-value
MIA_00323_151.47%5095e-168MIA_00323_1
UniRef50_Q5AQ8925.13%1953e-13Uncharacterized protein n=7 Tax=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) TaxID=227321 RepID=Q5AQ89_EMENI
A0A167D9C8_9ASCO27.54%1672e-10Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_901 PE=4 SV=1
B5FVH8_YARLI22.84%1628e-07YALI0E14388p2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E14388g2 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2927
Predicted cleavage: 13

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 654

Detailed signature matches

  1. Domain IPR012337
    Ribonuclease H-like domain
    1. SSF53098 (Ribonucle...)
    2. G3DSA:3.30.42...
  2. Domain IPR001584
    Integrase, catalytic core
    1. PS50994 (INTEGRASE)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_00424_1
MFGIRKPSSSRLKAEIPHYSEFGITWFPFFGEPHPFNSYRFSETTNPNYDPHDFHSKFDPENDLLFFILDLYKFVKSYKE
GITKSQLSKTLNVVLPPDWNVRSSAVNVLNRIMKTKYTLDLRARDYDRFKNSFDFYNYFNEYSRVQKKYLETPYGKLDTW
LMSVHPDVRQQLMLKYAGHFTVGGYPIYDPKTQQAEYKALTQTLEAAALQIHRNMRGTTKRSTSISSSNPSTPTKRDPST
SLPITASPGAKPDTINETETLSVDDYENFDSNLTMVTSDDPEAAAEFVRKFPTRPCQVLSIDYVPGFPDDQGYDMLFIVQ
DRFTKGIFLAPCSRPDTPEQFWNTFSDLVLARAGGYPEQVVSSGRRSKFKGFFEDKCKEHNIKHLRTSTFKPQIGGGLQQ
AKKRITKFLKEQPSNKGKYAYWVDLLIECESDYNSHNNPISGVSPYFCMYGSQLLTKVPEVIGEERFAKVKTKLERSLKA
NTNETLEATWKRVFYRLKAHADSATAAYQRQNADEDESGDENNGGNRRRSKRQSIGKSASKETLKEDKSENSTLNNSSGN
NSADERAPKDNNKENEHNDDDDDDNNSNKTKTSVASSVQNSPFKKHIRSFLTDEAPASPTAPLEPKTINRNSVISEAVRK
LNATSLEDKVQIQV

GO term prediction

Biological Process

GO:0015074 DNA integration

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.