Protein
MCA_00420_1
Length
663 amino acids
Browser: contigA:1322725-1324717+
RNA-seq: read pairs 1721, FPKM 32.0, percentile rank 54.6% (100% = highest expression)
Protein function
| EGGNOG: | 0PGR8 | PGUG_05822 | PDCD2_C domain protein |
|---|---|---|---|
| SGD closest match: | S000005382 | TSR4 | 20S rRNA accumulation protein 4 |
| CGD closest match: | CAL0000182014 | orf19.5168 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00367_1 | 28.71% | 627 | 4e-46 | MIA_00367_1 |
| UniRef50_A0A1E4T3R0 | 32.14% | 140 | 9e-14 | Uncharacterized protein n=1 Tax=Candida arabinofermentans NRRL YB-2248 TaxID=983967 RepID=A0A1E4T3R0_9ASCO |
| A0A1E3PG90_9ASCO | 31.58% | 190 | 5e-17 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83893 PE=4 SV=1 |
| A0A0J9X4R8_GEOCN | 48.00% | 75 | 1e-14 | Similar to Saccharomyces cerevisiae YOL022C TSR4 Cytoplasmic protein required for correct processing of the 20S pre-rRNA at site D to generate mature 18S rRNA OS=Geotrichum candidum GN=BN980_GECA02s06104g PE=4 SV=1 |
| A0A161HGY1_9ASCO | 50.00% | 66 | 5e-15 | Tsr4p OS=Sugiyamaella lignohabitans GN=TSR4 PE=4 SV=1 |
| Q5A5B2_CANAL | 33.12% | 160 | 6e-14 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5168 PE=4 SV=1 |
| Q6CF93_YARLI | 27.32% | 194 | 5e-13 | YALI0B09119p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B09119g PE=4 SV=1 |
| A0A060T770_BLAAD | 50.00% | 66 | 2e-12 | ARAD1B21120p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B21120g PE=4 SV=1 |
| A0A1E4TEU6_9ASCO | 48.48% | 66 | 1e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2009 PE=4 SV=1 |
| TSR4_YEAST | 28.69% | 122 | 2e-08 | 20S rRNA accumulation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TSR4 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0982
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
663
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00420_1 MSGSKQPSSRNQDDIEEFYKRNQDDVEKEYSYDDEEKEYKVDDSLIEYSRNNVRGKQIHEDVETNVILGFVDDEDDDEEE EESFKPTYKDSFLGGKPVWLNDKSVPPKNFVQCDYCNKWMTLLLQLNAAPFEFLDQFYDRVLYLFVCQNSSCQKSHKAGA PPAKRGTTTTALGFGQGAIKCVRGIMKNKAIEKQRQDAVLAQKKAEKEKREAAEREKLERQKKLESEKIRGEDIFGKKSE GASNPFAVAGSNPFATAAASSSPFAPAAVTSANPFAIPTIEKKKEEPIKKPAPAKKVEKDEKKLTYAEIASSKTAKQTNT VQVEQEQQEEKKADQEIPKEEKKEEEEEEKLADTITPEYSTDEFPSFPICKYLVTEPEVVDADFLNPSLNSSKEDDDSDG DDDEDDGDDDDFKGDEFKNFKIDANNSLLEAATKKTLQNEDKAFAKFCRLVSQNPEQVIRYYRFPSANTEKDIIKLASHI SSSSNENGTLEYNPLNFISYNPQRAKQELGTLVDDTCLPVLYSSKDSLATKLLLPPQPDQEEGAEPATDPYYYFNLSIPA STQHSSSSLSSTTAATTKQKSSSSVYTINLKQPQAVLRTIEFQVMPHIISYLEGHLNAKEILSKGMEWGTIYVATPLLEN LESLKFDANGVAYSLEWVGIQWE
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
GO:0005737 cytoplasm