Protein
MCA_00412_1
Length
722 amino acids
Description: histone deacetylase
Browser: contigA:1295832-1298001-
RNA-seq: read pairs 565, FPKM 9.7, percentile rank 25.4% (100% = highest expression)
Protein function
| Annotation: | histone deacetylase | ||
|---|---|---|---|
| EGGNOG: | 0PJE7 | PGUG_04667 | Histone deacetylase domain |
| SGD closest match: | S000003162 | HOS2 | Probable histone deacetylase HOS2 |
| CGD closest match: | CAL0000175821 | HOS1 | Histone deacetylase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XIA3_GEOCN | 55.88% | 272 | 1e-99 | Histone deacetylase OS=Geotrichum candidum GN=BN980_GECA18s02056g PE=4 SV=1 |
| UniRef50_A0A0J9XIA3 | 55.88% | 272 | 3e-96 | Histone deacetylase n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XIA3_GEOCN |
| MIA_01397_1 | 59.65% | 285 | 3e-98 | MIA_01397_1 |
| A0A060TEQ7_BLAAD | 50.39% | 256 | 2e-76 | Histone deacetylase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D09768g PE=3 SV=1 |
| A0A1E3PFW4_9ASCO | 50.00% | 278 | 1e-74 | Histone deacetylase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_27122 PE=3 SV=1 |
| A0A161HFP4_9ASCO | 49.08% | 271 | 6e-65 | Histone deacetylase OS=Sugiyamaella lignohabitans GN=RPD3 PE=4 SV=1 |
| A0A1D8PMG7_CANAL | 47.76% | 268 | 9e-63 | Histone deacetylase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=HOS1 PE=4 SV=1 |
| Q6C3Y5_YARLI | 40.70% | 285 | 1e-59 | Histone deacetylase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E31262g PE=3 SV=1 |
| HOS2_YEAST | 38.96% | 231 | 1e-33 | Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1 |
| A0A1E4TLW4_9ASCO | 34.16% | 243 | 2e-31 | Histone deacetylase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1312 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0055
Protein family membership
- Histone deacetylase superfamily (IPR000286)
Domains and repeats
-
Domain
1
100
200
300
400
500
600
722
Detailed signature matches
no IPR
Unintegrated signatures
-
SSF52768 (Arginase/...)
-
mobidb-lite (disord...)
Protein sequence
>MCA_00412_1 MTTPDAHASDAIEVNSFGGDSQTLSTVIDSNNNDDSNGHINLSHENKNILDNASNQESITQGSNPKSILKKKSSFPISDT TSQLDAQSDIGVTKPLDVNGKKLNSPPPTLSKLKLSRNRSTIKKRIRSRRNGPPVGYACNTTLIRLSNRLPSNIGRAILV HTLIHAYKLFTPINSNIGQEQQLRIQSLLRKRKLKRKSFLTKNERFNDERQCMVLPVYPLSNREMTQYHDPEFIKFITEL DNAGDEYEQDDNDGEEIESEDTDDEKSPKPLHLIPYSLSRQQDGRQQNSNRKLTSKLMKRYEQFGVEYDCPYFEGISDYV SIVAGASVACANYVIKRSLDQEVYIYQPPEPADETKEAIDSTDGEKNSVLNHSNGDNSNDTTEVKPRVRFQLPEKPKKIK RRRNDEGKQDTNLGNDNFKPMEHDIDEEEEDTSEEEDEDDELQQPIAINWQGGRHHAKKAKCAGFCYINDAVLCIQRLRS KFNKVLYLDLDLHHGDGVETAFSRTNKVACVSIHRYDRGFYPGTPNGSLEYMGGGESGLKFAKQGSNIKGQSFPPGYGYT LNIPTQRGLSGKSLDRIFKEIIDVFVVNYFKPDAIVVVVGCDGLARDEHAEWNLEIKDYERVIREYILDKWNLPTVFLGG GGYHHTDTARCWTFLTASILGRNDQYKWDDIPEHHMLQEYAQDGYRFHIDTKNETRPDENEGEYLDNMISLLQKRFENFK FI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.