Protein
MCA_00398_2
Length
335 amino acids
Browser: contigA:1254755-1255871+
RNA-seq: read pairs 2202, FPKM 81.0, percentile rank 75.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PRD5 | FGSG_08536 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile |
|---|
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01456_1 | 58.97% | 78 | 1e-27 | MIA_01456_1 |
| A0A0J9XBA2_GEOCN | 47.47% | 99 | 9e-24 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA08s03882g PE=4 SV=1 |
| UniRef50_A0A0J9XBA2 | 47.47% | 99 | 2e-20 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBA2_GEOCN |
| A0A167DL72_9ASCO | 39.29% | 84 | 1e-11 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1311 PE=4 SV=1 |
| A0A060T490_BLAAD | 40.26% | 77 | 2e-10 | ARAD1C02684p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02684g PE=4 SV=1 |
| A0A1E3PM75_9ASCO | 41.57% | 89 | 9e-09 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_77722 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0407
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
335
Detailed signature matches
-
-
SSF54928 (RNA-bindi...)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00398_2 MSNPTESSVPEPESSIVNNGEIPDGPRDSRERRYSVDKRPASPHSRSRGRSLSAGPRDPSRSPRRSLSPPRDYSRSPRRS RRDYSRSPSISRSRSRSWSRSRSRSYSRSPSYSRSRSRSRSFSRSRSRSLSPSFKTRRRRGGDRRSKDKPIYGKIAIDNL RINVREDHIREIFGGYGKIETVWFTKPNERIKKLKNIQGYSCYILYQTPGQARRAECFMDGGMIDNIKVFVKCLKGPSTT ERPNTRKSFPKSKDRRVKRKRRGVDTYRPKRQRSYSPDYNDRRGKRSRNYSRSRSRSRSMSRSRSRSRSPGFSPNRRRRS YSRSISRSYSPPPRK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.