Protein
MCA_00389_1
Length
465 amino acids
Browser: contigA:1200479-1201877+
RNA-seq: read pairs 934, FPKM 24.8, percentile rank 47.5% (100% = highest expression)
Protein function
| EGGNOG: | 0PPD2 | Inherit from KOG: unconventional SNARE in the ER 1 homolog (S. cerevisiae) | |
|---|---|---|---|
| SGD closest match: | S000003066 | USE1 | Protein transport protein USE1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01448_1 | 48.40% | 188 | 5e-45 | MIA_01448_1 |
| A0A167FC81_9ASCO | 49.54% | 109 | 1e-32 | Use1p OS=Sugiyamaella lignohabitans GN=USE1 PE=4 SV=1 |
| UniRef50_A0A167FC81 | 49.54% | 109 | 3e-29 | Use1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167FC81_9ASCO |
| A0A0J9X5Q8_GEOCN | 48.65% | 111 | 2e-28 | Similar to Saccharomyces cerevisiae YGL098W USE1 Essential SNARE protein involved in retrograde traffic from the Golgi to the ER OS=Geotrichum candidum GN=BN980_GECA03s02529g PE=4 SV=1 |
| A0A060T8Q9_BLAAD | 41.18% | 102 | 9e-26 | ARAD1D13266p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D13266g PE=4 SV=1 |
| A0A1E3PP21_9ASCO | 43.56% | 101 | 3e-24 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81743 PE=4 SV=1 |
| Q6CB62_YARLI | 48.00% | 100 | 7e-24 | YALI0C21626p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21626g PE=4 SV=1 |
| USE1_YEAST | 32.98% | 94 | 3e-10 | Protein transport protein USE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=USE1 PE=1 SV=1 |
| A0A1E4TLV2_9ASCO | 29.70% | 101 | 8e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_43315 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0461
Protein family membership
- Vesicle transport protein, Use1 (IPR019150)
Domains and repeats
None predicted.
Detailed signature matches
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
-
cd15860 (SNARE_USE1)
-
mobidb-lite (disord...)
Residue annotation
-
heterotetramer int...
-
zero layer cd15860
Protein sequence
>MCA_00389_1 MAQSAILDDSAFVREADSLIKYLDQEYAKTMYTFKEEEQLEQEDDEEKLKALHLIQQLEVSKLSTNIENSRNIILTAPPN TLAVPPSSTMATVQSTYLSNHGDMFNKTSTDKNEGYSISNSFSKILSTAASTLGANTGAAQEEDAGDGLTGKPIDPKKMI RSHKYSASVASVSNYFDDEEQEEDSMEQKSQGKGFKLPPKTSSLSQVDSKSLYANKNNKGYIFKSSIIFPTNHNQKDSKK EGEEGDDEDQNHSNDTIKEQLKAIKNDPSLHLKGPDNHKQFQDLTSKAMDLRLLVRKRELAELDQQRAKLEAQAAQAAAE AARLAREAVKNSQEGEEDSLLSNINKASASSSSKTDEKKALSDEDKVRLQQNTQESIAGDILSLVATIKENALRFQESIT HDTAVLNDTAESLEKSSGLMGNVGSRLNKYHKSTAIGWWFYIWATLGMIAAVVIGMLIIQLFPKW
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.