Protein
MCA_00388_1
Length
349 amino acids
Gene name: SPT3
Description: Protein SPT3
Browser: contigA:1199087-1200197-
RNA-seq: read pairs 414, FPKM 14.6, percentile rank 33.4% (100% = highest expression)
Protein function
| Annotation: | SPT3 | Protein SPT3 | |
|---|---|---|---|
| KEGG: | K11313 | SUPT3H | transcription initiation protein SPT3 |
| EGGNOG: | 0PHPH | SPT3 | SAGA-like transcriptional regulatory complex subunit Spt3 |
| SGD closest match: | S000002800 | SPT3 | Protein SPT3 |
| CGD closest match: | CAL0000183199 | SPT3 | Transcriptional regulator |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XIE9_GEOCN | 68.24% | 340 | 4e-146 | Similar to Saccharomyces cerevisiae YDR392W SPT3 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes OS=Geotrichum candidum GN=BN980_GECA19s00219g PE=4 SV=1 |
| A0A060SY81_BLAAD | 65.88% | 337 | 2e-126 | ARAD1A18700p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A18700g PE=4 SV=1 |
| A0A1E3PM89_9ASCO | 59.76% | 333 | 7e-125 | TFIID-18kDa-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50477 PE=4 SV=1 |
| Q6C533_YARLI | 54.60% | 337 | 2e-114 | YALI0E21417p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E21417g PE=4 SV=1 |
| A0A1D8PU74_CANAL | 53.39% | 339 | 5e-108 | Transcriptional regulator OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SPT3 PE=4 SV=1 |
| UniRef50_A0A1D8PU74 | 53.39% | 339 | 1e-104 | Transcriptional regulator n=29 Tax=Fungi TaxID=4751 RepID=A0A1D8PU74_CANAL |
| SPT3_YEAST | 52.79% | 341 | 4e-104 | Protein SPT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SPT3 PE=1 SV=1 |
| MIA_01447_1 | 76.30% | 211 | 1e-99 | MIA_01447_1 |
| A0A1E4TEU3_9ASCO | 45.70% | 337 | 5e-81 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2023 PE=4 SV=1 |
| A0A167FFB7_9ASCO | 71.43% | 196 | 1e-81 | Transcriptional regulator SPT3 OS=Sugiyamaella lignohabitans GN=SPT3 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0029
Protein family membership
- Transcription initiation factor IID, subunit 13 (IPR003195)
Domains and repeats
-
Domain
1
50
100
150
200
250
300
349
Detailed signature matches
-
-
SSF47113 (Histone-fold)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00388_1 MTEKEREKYKYRLEIQQMMFVSGETCDPPLETTSLIEEIVRDQVVEILYQASNVSFRRGSRSIAAEDLIFLIRHDKAKVN RLKSYLSWKDVRKNTRDQEGGGVEGADLLDDPGVLNQPGGANGNGAGAANGGASGTSSADGKSSRAYKKSKIRLPWEMAF QFREQPLEQENDGAEDDIDESEMEANAATLERLKNADDRTRQMTKEEYVHWSECRQASFTYRKGKRFREWAGISLLTDSK PHDDIIDILGFLTFEIVTCLTEEALKVKEQEEELEVQSNRNKKQSIDGTTVEKKRKRERHLFDGPDEDQKPIMARHVQEA FRRIQALKPKARVLKRYTGGLVRTKPVLL
GO term prediction
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
Molecular Function
GO:0046982 protein heterodimerization activity
Cellular Component
None predicted.