Protein
MCA_00383_1
Length
519 amino acids
Gene name: PRI1
Description: DNA primase small subunit
Browser: contigA:1185995-1187555-
RNA-seq: read pairs 468, FPKM 11.1, percentile rank 27.7% (100% = highest expression)
Protein function
| Annotation: | PRI1 | DNA primase small subunit | |
|---|---|---|---|
| KEGG: | K02684 | PRI1 | DNA primase small subunit [EC:2.7.7.-] |
| EGGNOG: | 0PG27 | FG06339.1 | DNA primase |
| SGD closest match: | S000001447 | PRI1 | DNA primase small subunit |
| CGD closest match: | CAL0000183321 | orf19.4030 | DNA primase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XFL7_GEOCN | 54.56% | 471 | 2e-174 | DNA primase OS=Geotrichum candidum GN=BN980_GECA13s03101g PE=3 SV=1 |
| MIA_01445_1 | 49.60% | 500 | 3e-162 | MIA_01445_1 |
| UniRef50_Q0UF19 | 44.15% | 521 | 2e-133 | DNA primase n=148 Tax=Fungi TaxID=4751 RepID=Q0UF19_PHANO |
| A0A1E3PK24_9ASCO | 46.41% | 446 | 2e-133 | DNA primase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_70151 PE=3 SV=1 |
| A0A167D753_9ASCO | 46.86% | 446 | 1e-129 | DNA primase OS=Sugiyamaella lignohabitans GN=PRI1 PE=3 SV=1 |
| A0A1D8PP73_CANAL | 42.11% | 456 | 4e-119 | DNA primase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4030 PE=3 SV=1 |
| A0A060T4A9_BLAAD | 41.81% | 452 | 7e-117 | DNA primase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A15378g PE=3 SV=1 |
| Q6CF04_YARLI | 40.81% | 446 | 5e-111 | DNA primase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B11396g PE=3 SV=1 |
| A0A1E4TCF5_9ASCO | 40.00% | 445 | 2e-105 | DNA primase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_29364 PE=3 SV=1 |
| PRI1_YEAST | 37.96% | 461 | 7e-105 | DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRI1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0081
Protein family membership
- DNA primase, small subunit (IPR002755)
- DNA primase, small subunit, eukaryotic/archaeal (IPR014052)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF01896 (DNA_primase_S)
-
no IPR
Unintegrated signatures
-
-
-
SSF56747 (Prim-pol ...)
-
mobidb-lite (disord...)
Residue annotation
-
nucleotide binding...
-
zinc binding site ...
-
subunit interface ...
Protein sequence
>MCA_00383_1 MPDIIAVSKELEKQNAGEEPVSGVEAEFEESPSNIDNKPSSTTNSNDIDLDEALGDIDENDLDIGGSQPSSGTDPIIMKQ YYERFFPFQLFFRWLNHSPKPTRSFTDREIAFTLSNDAYLRYQSYPDADAFKNEVLKLNPSRFEVGPVYSANPRDRKLLN KTQFKPLRKELVFDIDLTDYDDFRTCCQGKSICTNCWKLITVAIKVLDVALRDDFGFQHILWVYSGRRGAHAWICDKRAQ VLDDSSRRAIASYLQVKKRNATGDDLGIGSIGGNISIRRQFHPHFERSLNIINKDFKDILKAQNPWGNDSGIKWLVSRIP DKELASELKTLWEERLMEEKEVNISDEDIRINSYKQWEDLEEHEQQIFEAKDSKSQEEADEFHNSMLVAKAKIMLESVYP RLDIEVTRHLNHLLKSPFCVHPDTGNVCVPIDLEKVDSFNPEKVPKVRRLMYELDSYKATHKSQEPGESSSTPAPRISDA DKTSLSSYITLFKNFTSGLVRENLHEKRKREENEANLDF
GO term prediction
Biological Process
GO:0006269 DNA replication, synthesis of RNA primer
Molecular Function
GO:0003896 DNA primase activity
Cellular Component
None predicted.