Protein
MCA_00366_1
Length
230 amino acids
Browser: contigA:1153616-1154309+
RNA-seq: read pairs 7571, FPKM 405.0, percentile rank 93.6% (100% = highest expression)
Protein function
| EGGNOG: | 0PN4N | PGUG_02587 | clathrin light chain |
|---|---|---|---|
| SGD closest match: | S000003399 | CLC1 | Clathrin light chain |
| CGD closest match: | CAL0000187026 | CLC1 | Clathrin light chain |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01429_1 | 65.00% | 240 | 7e-98 | MIA_01429_1 |
| A0A0J9X3U0_GEOCN | 57.26% | 241 | 9e-82 | Clathrin light chain OS=Geotrichum candidum GN=BN980_GECA02s00912g PE=3 SV=1 |
| UniRef50_A0A0J9X3U0 | 57.26% | 241 | 2e-78 | Clathrin light chain n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9X3U0_GEOCN |
| A0A1E3PH75_9ASCO | 49.13% | 230 | 8e-67 | Clathrin light chain OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47527 PE=3 SV=1 |
| A0A060TER0_BLAAD | 48.79% | 248 | 2e-66 | Clathrin light chain OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D09878g PE=3 SV=1 |
| Q6C3P2_YARLI | 42.44% | 238 | 3e-44 | Clathrin light chain OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E33253g PE=3 SV=1 |
| Q5AMQ2_CANAL | 39.73% | 219 | 1e-41 | Clathrin light chain OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CLC1 PE=3 SV=1 |
| A0A1E4TC71_9ASCO | 35.50% | 231 | 2e-33 | Clathrin light chain OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_138900 PE=3 SV=1 |
| CLC1_YEAST | 34.52% | 252 | 2e-29 | Clathrin light chain OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLC1 PE=1 SV=1 |
| A0A170QZI1_9ASCO | 32.93% | 82 | 3e-07 | Clathrin light chain OS=Sugiyamaella lignohabitans GN=clc1 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2365
Protein family membership
- Clathrin light chain (IPR000996)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF01086 (Clathrin_l...)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00366_1 MSKFPALEDIDDEIAPSTVNTAADNEDDFVDFTSAGGADDFLSREKALLGDDAKEFATEEDSKIKGEEDEIDQFKSSFPD IDGAAEVAASTQQYDSEPEQLSSNVKKLSLEDSDAIREWRERQALQIQERDKISEEKRQETREAAKRAIDDFYDNYADKK EKQIEKVRAEEKKFLEERDNSVVGTTWDRIAKLIDTSKAGAKTELHDKSRFKEVILSLKGNPDAPGAAGY
GO term prediction
Biological Process
GO:0006886 intracellular protein transport
GO:0016192 vesicle-mediated transport
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0030130 clathrin coat of trans-Golgi network vesicle
GO:0030132 clathrin coat of coated pit