Protein
MCA_00340_1
Length
1,187 amino acids
Gene name: VAM6
Description: Vacuolar morphogenesis protein 6
Browser: contigA:1049478-1053042+
RNA-seq: read pairs 1575, FPKM 16.4, percentile rank 36.1% (100% = highest expression)
Protein function
| Annotation: | VAM6 | Vacuolar morphogenesis protein 6 | |
|---|---|---|---|
| KEGG: | K20183 | VPS39 | Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 |
| EGGNOG: | 0PHR7 | VAM6 | Vacuolar morphogenesis protein AvaB |
| SGD closest match: | S000002235 | VAM6 | Vacuolar morphogenesis protein 6 |
| CGD closest match: | CAL0000181558 | orf19.1567 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00029_1 | 61.22% | 459 | 3e-170 | MIA_00029_1 |
| A0A0J9XJB3_GEOCN | 54.59% | 458 | 6e-135 | Similar to Saccharomyces cerevisiae YDL077C VAM6 Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion OS=Geotrichum candidum GN=BN980_GECA21s00813g PE=4 SV=1 |
| UniRef50_A0A0J9XJB3 | 54.59% | 458 | 1e-131 | Similar to Saccharomyces cerevisiae YDL077C VAM6 Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJB3_GEOCN |
| A0A167D816_9ASCO | 44.18% | 455 | 4e-105 | Vam6p OS=Sugiyamaella lignohabitans GN=VAM6 PE=4 SV=1 |
| A0A060T4E3_BLAAD | 41.79% | 457 | 2e-103 | ARAD1A16368p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A16368g PE=4 SV=1 |
| Q6CEZ7_YARLI | 39.65% | 454 | 4e-83 | YALI0B11550p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B11550g PE=4 SV=1 |
| A0A1E4THW4_9ASCO | 31.04% | 451 | 6e-58 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_3041 PE=4 SV=1 |
| A0A1D8PGN0_CANAL | 27.71% | 480 | 4e-40 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1567 PE=4 SV=1 |
| VAM6_YEAST | 24.89% | 466 | 2e-29 | Vacuolar morphogenesis protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VAM6 PE=1 SV=1 |
| A0A1E3PE63_9ASCO | 36.17% | 188 | 2e-21 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_84320 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1462
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
200
400
600
800
1000
1187
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00340_1 MSPSNSASQQDNSKNLINALKIQKIVTLPDGERGKITSIYTYSDKLLLGLSNGSLLVYLIDDPLSTSETKLTLEKHLKNF SPRSIDQIGVLKDTGSIVILSDSVVSLYDIDTYSLDETLKTTKGTTTFAISFGVDDEIDEEGSSPMTTITRLVIGCKRKL ICYEWIDSEFNEVKDIILPDRVKSLSFFDHNIAVCGLSSDYCIIDIARDQISNIALPGSHSHYSFTSVGISYIGIGGRYP FPFSTTLPDKTALLVKDTTSQFVNKEGQLLERPAIPLSSPLESIGFSYPYLVCIFSKHIEVRNPFTTTLLQTIDLQGVKF INEGKFCCVVSNDQVYRLSLSSSLKTQIKTLADKHLLDEAISILESVDSTYIVDDNKDSILRDLKILKAIDMLRIDKDFQ GSLQLFSQVSAPPKTVVGLFPSQVSGTGEDLIQYMESLVKTRSLHSRNLSALSNIPPSSSSSAATSLADSNKSSKHAKKS APSSGSNSPSSNQAPNTISQVLSSSSETSSGSDNRRHTTSTIKAEWTDAELSAAVNALVTFLADTRRKISSISSNDGPVR DPVSGLVLTSDIYEEEEEIEIVEEVEEKLDPNGGPEDKNADNQSQSDKSSTDDEIKGPPIIPKKKVVRKEKIKTLNKAAE LVDTTMFKCYIIQNPALIGPLLRIHNHCNPDTVKTVLSHLGKWKELIDFYFGKKLHRQALELLRKLAGGEYICNSNEDDS ASTKSQRKHKKGKSISSHIHATNVPSYLKGPEPTVQYLKRLNNDYLDLIFEFGKWPISQNESFGEDLFLDDSSESESLER PKVLRFLERLSYPCAQSLTIKYLEYIIFEKEETAAYFHTKLALNYLKSMITKSKSLDPKVIAESEKLFDKLVLFLKEKDS RYRVEKVLSAIPDSDTECTRQELEIKAILYGKEGKVREALMIYTFSLMDDTKARAFCADVYDENTVLGRHALHTLMALYL TPPEATKFPQRLDLALDLLASQGSRMSVVEIINTLPSDTKIHDIAIFLTSQIRTLRASWNNAQIDTALRKVDLVKAQEEL YQRQQKSVTITNLKTCRVCFKRLGHSVISVFPDGTAIHYGCARAYQKTLDEEKEKKLNMKNKKKLLSKKKSAELSGSFGD SLSSNENRGGLFSHGLNSGFLGHTLSKVASNNSSLTGLDTHSHSSNHRPMSLIASDNSSHKSSFSNN
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.