Protein

MCA_00304_1

Length
440 amino acids

Description: protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains

Browser: contigA:933881-935204+

RNA-seq: read pairs 266, FPKM 7.5, percentile rank 21.3% (100% = highest expression)

Protein function

Annotation:protein with DDE superfamily endonuclease and DNA-binding HTH (CenpB-type) domains
EGGNOG:0PQVYFGSG_14035conserved hypothetical protein

Protein alignments

%idAln lengthE-value
UniRef50_A0A179EY9225.90%3324e-29Transposase n=11 Tax=Hypocreomycetidae TaxID=222543 RepID=A0A179EY92_METCM
A0A1D8PTV2_CANAL26.52%3281e-24Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09050CA PE=4 SV=1
MIA_01692_122.77%3034e-11MIA_01692_1
Q6C7B4_YARLI20.07%2999e-10YALI0E02178p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E02178g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0312

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 440

Detailed signature matches

  1. Domain IPR006600
    HTH CenpB-type DNA-binding domain
    1. PS51253 (HTH_CENPB)
  2. Domain IPR004875
    DDE superfamily endonuclease domain
    1. PF03184 (DDE_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_00304_1
MNHKESSTVNASKHQVLSPSPSPTTQMMKEKAYISQMLLSPYEEQLISIWFVVEALFFRAPYHSEIKKFAQIMLNLRNKE
AQVGSDWTKRFFSRHPEIRHLISHRDFSSPNSIPTKMPKLDFLEAYNTLNNMYNFDRSNIFYMQAIKLEYETDKTDTQTT
SSSDNSENTECTTVIECISAAGKKLKPMVLFQAYDNAVDILPPTVPDWSFLVTEKGLQSPVSIYSWLNDCFFPETATSSS
SASTTAEYKFLLVDGNRCNFTPEIIQLCLRNQIIVVCTTPEMENYLRPFKETCFLPLVNNFNTRLKKMSLMNNTVEKYDF
IQCYNATRSKILTTANIRKSYRDTQIWPRQQQQQHQQNTVSPSLISVPIISVIPSKRQLDSEAILNDGGSSVYTRYFNGI
GFSSNSNVMKAAKHADREIEELRRKLAEKTLECENLKKLL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.