MCA_00303_1

Browser: contigA:930004-930643-

RNA-seq: read pairs 446, FPKM 25.9, percentile rank 48.5% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0423

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. G3DSA:1.10.28...
   104 - 188

   GENE3D
   G3DSA:1.10.287.700 (G3DSA:1.10.287.700)
2. G3DSA:1.20.12...
   16 - 103

   GENE3D
   G3DSA:1.20.120.20 (G3DSA:1.20.120.20)
3. NON_CYTOPLASM... (N...)
   22 - 212

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
4. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
5. SIGNAL_PEPTID... (S...)
   17 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
6. SIGNAL_PEPTID... (S...)
   5 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
7. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
8. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_00303_1
MVRSTPLSIALTLALVSSAAAQVTQTEVVTASEAETTTVAGGGEGGDATSIVSEGAEDISSAVTEIAGGASESISEILSQ
AESEASASASAISESISASISEASVSSVRESISEAAESVSQETESVASDASEAIESISRSVSEIINSLTSAADDAVGSIS
RSASSVIGSATSAHHEATSGAVEDGNGANTLPLKGVLISSSLISAFVLALAL

GO term prediction